274 related articles for article (PubMed ID: 28348826)
21. The aspartate aminotransferase-like domain of Firmicutes MocR transcriptional regulators.
Milano T; Contestabile R; Lo Presti A; Ciccozzi M; Pascarella S
Comput Biol Chem; 2015 Oct; 58():55-61. PubMed ID: 26026720
[TBL] [Abstract][Full Text] [Related]
22. Salmonella typhimurium PtsJ is a novel MocR-like transcriptional repressor involved in regulating the vitamin B
Tramonti A; Milano T; Nardella C; di Salvo ML; Pascarella S; Contestabile R
FEBS J; 2017 Feb; 284(3):466-484. PubMed ID: 27987384
[TBL] [Abstract][Full Text] [Related]
23. Role of the aminotransferase domain in Bacillus subtilis GabR, a pyridoxal 5'-phosphate-dependent transcriptional regulator.
Okuda K; Kato S; Ito T; Shiraki S; Kawase Y; Goto M; Kawashima S; Hemmi H; Fukada H; Yoshimura T
Mol Microbiol; 2015 Jan; 95(2):245-57. PubMed ID: 25388514
[TBL] [Abstract][Full Text] [Related]
24. Crystal structure of Bacillus subtilis GabR, an autorepressor and transcriptional activator of gabT.
Edayathumangalam R; Wu R; Garcia R; Wang Y; Wang W; Kreinbring CA; Bach A; Liao J; Stone TA; Terwilliger TC; Hoang QQ; Belitsky BR; Petsko GA; Ringe D; Liu D
Proc Natl Acad Sci U S A; 2013 Oct; 110(44):17820-5. PubMed ID: 24127574
[TBL] [Abstract][Full Text] [Related]
25. Computational classification of MocR transcriptional regulators into subgroups as a support for experimental and functional characterization.
Pascarella S
Bioinformation; 2019; 15(2):151-159. PubMed ID: 31435161
[TBL] [Abstract][Full Text] [Related]
26. Extending the classification of bacterial transcription factors beyond the helix-turn-helix motif as an alternative approach to discover new cis/trans relationships.
Rigali S; Schlicht M; Hoskisson P; Nothaft H; Merzbacher M; Joris B; Titgemeyer F
Nucleic Acids Res; 2004; 32(11):3418-26. PubMed ID: 15247334
[TBL] [Abstract][Full Text] [Related]
27. Transcriptional regulation of NAD metabolism in bacteria: NrtR family of Nudix-related regulators.
Rodionov DA; De Ingeniis J; Mancini C; Cimadamore F; Zhang H; Osterman AL; Raffaelli N
Nucleic Acids Res; 2008 Apr; 36(6):2047-59. PubMed ID: 18276643
[TBL] [Abstract][Full Text] [Related]
28. Study of DNA binding and bending by Bacillus subtilis GabR, a PLP-dependent transcription factor.
Amidani D; Tramonti A; Canosa AV; Campanini B; Maggi S; Milano T; di Salvo ML; Pascarella S; Contestabile R; Bettati S; Rivetti C
Biochim Biophys Acta Gen Subj; 2017 Jan; 1861(1 Pt A):3474-3489. PubMed ID: 27640111
[TBL] [Abstract][Full Text] [Related]
29. GntR family of regulators in Mycobacterium smegmatis: a sequence and structure based characterization.
Vindal V; Suma K; Ranjan A
BMC Genomics; 2007 Aug; 8():289. PubMed ID: 17714599
[TBL] [Abstract][Full Text] [Related]
30. Conformational transitions induced by γ-amino butyrate binding in GabR, a bacterial transcriptional regulator.
Frezzini M; Guidoni L; Pascarella S
Sci Rep; 2019 Dec; 9(1):19319. PubMed ID: 31848410
[TBL] [Abstract][Full Text] [Related]
31. Comparative genomics of regulation of fatty acid and branched-chain amino acid utilization in proteobacteria.
Kazakov AE; Rodionov DA; Alm E; Arkin AP; Dubchak I; Gelfand MS
J Bacteriol; 2009 Jan; 191(1):52-64. PubMed ID: 18820024
[TBL] [Abstract][Full Text] [Related]
32. Novel Transcriptional Regulons for Autotrophic Cycle Genes in Crenarchaeota.
Leyn SA; Rodionova IA; Li X; Rodionov DA
J Bacteriol; 2015 Jul; 197(14):2383-91. PubMed ID: 25939834
[TBL] [Abstract][Full Text] [Related]
33. Identification and analysis of DNA-binding transcription factors in Bacillus subtilis and other Firmicutes--a genomic approach.
Moreno-Campuzano S; Janga SC; Pérez-Rueda E
BMC Genomics; 2006 Jun; 7():147. PubMed ID: 16772031
[TBL] [Abstract][Full Text] [Related]
34. Comparative genomic analysis of the hexuronate metabolism genes and their regulation in gammaproteobacteria.
Suvorova IA; Tutukina MN; Ravcheev DA; Rodionov DA; Ozoline ON; Gelfand MS
J Bacteriol; 2011 Aug; 193(15):3956-63. PubMed ID: 21622752
[TBL] [Abstract][Full Text] [Related]
35. Dissimilatory metabolism of nitrogen oxides in bacteria: comparative reconstruction of transcriptional networks.
Rodionov DA; Dubchak IL; Arkin AP; Alm EJ; Gelfand MS
PLoS Comput Biol; 2005 Oct; 1(5):e55. PubMed ID: 16261196
[TBL] [Abstract][Full Text] [Related]
36. Control of methionine metabolism by the SahR transcriptional regulator in Proteobacteria.
Novichkov PS; Li X; Kuehl JV; Deutschbauer AM; Arkin AP; Price MN; Rodionov DA
Environ Microbiol; 2014 Jan; 16(1):1-8. PubMed ID: 24118949
[TBL] [Abstract][Full Text] [Related]
37. Transcriptional regulators of GntR family in Streptomyces coelicolor A3(2): analysis in silico and in vivo of YtrA subfamily.
Tsypik O; Yushchuk O; Zaburannyi N; Flärdh K; Walker S; Fedorenko V; Ostash B
Folia Microbiol (Praha); 2016 May; 61(3):209-20. PubMed ID: 26433722
[TBL] [Abstract][Full Text] [Related]
38. Evaluation of the Abundance of DNA-Binding Transcription Factors in Prokaryotes.
Sanchez I; Hernandez-Guerrero R; Mendez-Monroy PE; Martinez-Nuñez MA; Ibarra JA; Pérez-Rueda E
Genes (Basel); 2020 Jan; 11(1):. PubMed ID: 31947717
[TBL] [Abstract][Full Text] [Related]
39. RegPrecise: a database of curated genomic inferences of transcriptional regulatory interactions in prokaryotes.
Novichkov PS; Laikova ON; Novichkova ES; Gelfand MS; Arkin AP; Dubchak I; Rodionov DA
Nucleic Acids Res; 2010 Jan; 38(Database issue):D111-8. PubMed ID: 19884135
[TBL] [Abstract][Full Text] [Related]
40. Inferred regulons are consistent with regulator binding sequences in E. coli.
Qiu S; Wan X; Liang Y; Lamoureux CR; Akbari A; Palsson BO; Zielinski DC
PLoS Comput Biol; 2024 Jan; 20(1):e1011824. PubMed ID: 38252668
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]