89 related articles for article (PubMed ID: 28376782)
1. Tools and methods for high-throughput single-cell imaging with the mother machine.
Thiermann R; Sandler M; Ahir G; Sauls JT; Schroeder J; Brown S; Le Treut G; Si F; Li D; Wang JD; Jun S
Elife; 2024 Apr; 12():. PubMed ID: 38634855
[TBL] [Abstract][Full Text] [Related]
2. BactMAP: An R package for integrating, analyzing and visualizing bacterial microscopy data.
van Raaphorst R; Kjos M; Veening JW
Mol Microbiol; 2020 Jan; 113(1):297-308. PubMed ID: 31693257
[TBL] [Abstract][Full Text] [Related]
3. Unsupervised discovery of dynamic cell phenotypic states from transmitted light movies.
Nguyen P; Chien S; Dai J; Monnat RJ; Becker PS; Kueh HY
PLoS Comput Biol; 2021 Dec; 17(12):e1009626. PubMed ID: 34968384
[TBL] [Abstract][Full Text] [Related]
4. Non-invasive single-cell morphometry in living bacterial biofilms.
Zhang M; Zhang J; Wang Y; Wang J; Achimovich AM; Acton ST; Gahlmann A
Nat Commun; 2020 Dec; 11(1):6151. PubMed ID: 33262347
[TBL] [Abstract][Full Text] [Related]
5. BetaBuddy: An automated end-to-end computer vision pipeline for analysis of calcium fluorescence dynamics in β-cells.
Alsup AM; Fowlds K; Cho M; Luber JM
PLoS One; 2024; 19(3):e0299549. PubMed ID: 38489336
[TBL] [Abstract][Full Text] [Related]
6. A Pipeline for Dynamic Analysis of Mitochondrial Content in Developing T Cells: Bridging the Gap Between High-Throughput Flow Cytometry and Single-Cell Microscopy Analysis.
Dhyani V; Chann AS; Giri L; Russell SM; Charnley M
Methods Mol Biol; 2024; 2800():167-187. PubMed ID: 38709484
[TBL] [Abstract][Full Text] [Related]
7. Tools and methods for high-throughput single-cell imaging with the mother machine.
Thiermann R; Sandler M; Ahir G; Sauls JT; Schroeder JW; Brown SD; Le Treut G; Si F; Li D; Wang JD; Jun S
bioRxiv; 2024 Feb; ():. PubMed ID: 37066401
[TBL] [Abstract][Full Text] [Related]
8. Omnipose: a high-precision morphology-independent solution for bacterial cell segmentation.
Cutler KJ; Stringer C; Lo TW; Rappez L; Stroustrup N; Brook Peterson S; Wiggins PA; Mougous JD
Nat Methods; 2022 Nov; 19(11):1438-1448. PubMed ID: 36253643
[TBL] [Abstract][Full Text] [Related]
9. Segmentation, tracking and cell cycle analysis of live-cell imaging data with Cell-ACDC.
Padovani F; Mairhörmann B; Falter-Braun P; Lengefeld J; Schmoller KM
BMC Biol; 2022 Aug; 20(1):174. PubMed ID: 35932043
[TBL] [Abstract][Full Text] [Related]
10. Listeria monocytogenes Sublethal Injury and Viable-but-Nonculturable State Induced by Acidic Conditions and Disinfectants.
Arvaniti M; Tsakanikas P; Papadopoulou V; Giannakopoulou A; Skandamis P
Microbiol Spectr; 2021 Dec; 9(3):e0137721. PubMed ID: 34908469
[TBL] [Abstract][Full Text] [Related]
11. Advances and opportunities in image analysis of bacterial cells and communities.
Jeckel H; Drescher K
FEMS Microbiol Rev; 2021 Aug; 45(4):. PubMed ID: 33242074
[TBL] [Abstract][Full Text] [Related]
12. Automated cell segmentation in FIJI® using the DRAQ5 nuclear dye.
Schwendy M; Unger RE; Bonn M; Parekh SH
BMC Bioinformatics; 2019 Jan; 20(1):39. PubMed ID: 30658582
[TBL] [Abstract][Full Text] [Related]
13. Image analysis driven single-cell analytics for systems microbiology.
Balomenos AD; Tsakanikas P; Aspridou Z; Tampakaki AP; Koutsoumanis KP; Manolakos ES
BMC Syst Biol; 2017 Apr; 11(1):43. PubMed ID: 28376782
[TBL] [Abstract][Full Text] [Related]
14. Analytics and visualization tools to characterize single-cell stochasticity using bacterial single-cell movie cytometry data.
Balomenos AD; Stefanou V; Manolakos ES
BMC Bioinformatics; 2021 Oct; 22(1):531. PubMed ID: 34715773
[TBL] [Abstract][Full Text] [Related]
15. A Cell Segmentation/Tracking Tool Based on Machine Learning.
Deter HS; Dies M; Cameron CC; Butzin NC; Buceta J
Methods Mol Biol; 2019; 2040():399-422. PubMed ID: 31432490
[TBL] [Abstract][Full Text] [Related]
16. An automatic method for robust and fast cell detection in bright field images from high-throughput microscopy.
Buggenthin F; Marr C; Schwarzfischer M; Hoppe PS; Hilsenbeck O; Schroeder T; Theis FJ
BMC Bioinformatics; 2013 Oct; 14():297. PubMed ID: 24090363
[TBL] [Abstract][Full Text] [Related]
17. Machine learning applications in cell image analysis.
Kan A
Immunol Cell Biol; 2017 Jul; 95(6):525-530. PubMed ID: 28294138
[TBL] [Abstract][Full Text] [Related]
18. Bioimage Informatics in the context of Drosophila research.
Jug F; Pietzsch T; Preibisch S; Tomancak P
Methods; 2014 Jun; 68(1):60-73. PubMed ID: 24732429
[TBL] [Abstract][Full Text] [Related]
19.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
20.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
[Next] [New Search]