467 related articles for article (PubMed ID: 28379287)
1. ViPTree: the viral proteomic tree server.
Nishimura Y; Yoshida T; Kuronishi M; Uehara H; Ogata H; Goto S
Bioinformatics; 2017 Aug; 33(15):2379-2380. PubMed ID: 28379287
[TBL] [Abstract][Full Text] [Related]
2. Metavir: a web server dedicated to virome analysis.
Roux S; Faubladier M; Mahul A; Paulhe N; Bernard A; Debroas D; Enault F
Bioinformatics; 2011 Nov; 27(21):3074-5. PubMed ID: 21911332
[TBL] [Abstract][Full Text] [Related]
3. VIBRANT: automated recovery, annotation and curation of microbial viruses, and evaluation of viral community function from genomic sequences.
Kieft K; Zhou Z; Anantharaman K
Microbiome; 2020 Jun; 8(1):90. PubMed ID: 32522236
[TBL] [Abstract][Full Text] [Related]
4. DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication.
Tanizawa Y; Fujisawa T; Nakamura Y
Bioinformatics; 2018 Mar; 34(6):1037-1039. PubMed ID: 29106469
[TBL] [Abstract][Full Text] [Related]
5. GSDS 2.0: an upgraded gene feature visualization server.
Hu B; Jin J; Guo AY; Zhang H; Luo J; Gao G
Bioinformatics; 2015 Apr; 31(8):1296-7. PubMed ID: 25504850
[TBL] [Abstract][Full Text] [Related]
6. PARTIE: a partition engine to separate metagenomic and amplicon projects in the Sequence Read Archive.
Torres PJ; Edwards RA; McNair KA
Bioinformatics; 2017 Aug; 33(15):2389-2391. PubMed ID: 28369246
[TBL] [Abstract][Full Text] [Related]
7. VirGen: a comprehensive viral genome resource.
Kulkarni-Kale U; Bhosle S; Manjari GS; Kolaskar AS
Nucleic Acids Res; 2004 Jan; 32(Database issue):D289-92. PubMed ID: 14681415
[TBL] [Abstract][Full Text] [Related]
8. Prokaryotic Virus Orthologous Groups (pVOGs): a resource for comparative genomics and protein family annotation.
Grazziotin AL; Koonin EV; Kristensen DM
Nucleic Acids Res; 2017 Jan; 45(D1):D491-D498. PubMed ID: 27789703
[TBL] [Abstract][Full Text] [Related]
9. ViralZone: a knowledge resource to understand virus diversity.
Hulo C; de Castro E; Masson P; Bougueleret L; Bairoch A; Xenarios I; Le Mercier P
Nucleic Acids Res; 2011 Jan; 39(Database issue):D576-82. PubMed ID: 20947564
[TBL] [Abstract][Full Text] [Related]
10. Host Taxon Predictor - A Tool for Predicting Taxon of the Host of a Newly Discovered Virus.
Gałan W; Bąk M; Jakubowska M
Sci Rep; 2019 Mar; 9(1):3436. PubMed ID: 30837511
[TBL] [Abstract][Full Text] [Related]
11. MG-RAST, a Metagenomics Service for Analysis of Microbial Community Structure and Function.
Keegan KP; Glass EM; Meyer F
Methods Mol Biol; 2016; 1399():207-33. PubMed ID: 26791506
[TBL] [Abstract][Full Text] [Related]
12. Deciphering the Human Virome with Single-Virus Genomics and Metagenomics.
de la Cruz Peña MJ; Martinez-Hernandez F; Garcia-Heredia I; Lluesma Gomez M; Fornas Ò; Martinez-Garcia M
Viruses; 2018 Mar; 10(3):. PubMed ID: 29509721
[TBL] [Abstract][Full Text] [Related]
13. Virus genomics: what is being overlooked?
Kieft K; Anantharaman K
Curr Opin Virol; 2022 Apr; 53():101200. PubMed ID: 35051682
[TBL] [Abstract][Full Text] [Related]
14. Genome Annotation Transfer Utility (GATU): rapid annotation of viral genomes using a closely related reference genome.
Tcherepanov V; Ehlers A; Upton C
BMC Genomics; 2006 Jun; 7():150. PubMed ID: 16772042
[TBL] [Abstract][Full Text] [Related]
15. Single-virus genomics and beyond.
Martínez Martínez J; Martinez-Hernandez F; Martinez-Garcia M
Nat Rev Microbiol; 2020 Dec; 18(12):705-716. PubMed ID: 33024311
[TBL] [Abstract][Full Text] [Related]
16. PhEVER: a database for the global exploration of virus-host evolutionary relationships.
Palmeira L; Penel S; Lotteau V; Rabourdin-Combe C; Gautier C
Nucleic Acids Res; 2011 Jan; 39(Database issue):D569-75. PubMed ID: 21081560
[TBL] [Abstract][Full Text] [Related]
17. CpGAVAS, an integrated web server for the annotation, visualization, analysis, and GenBank submission of completely sequenced chloroplast genome sequences.
Liu C; Shi L; Zhu Y; Chen H; Zhang J; Lin X; Guan X
BMC Genomics; 2012 Dec; 13():715. PubMed ID: 23256920
[TBL] [Abstract][Full Text] [Related]
18. Bioinformatic Approaches for Comparative Analysis of Viruses.
Amgarten D; Upton C
Methods Mol Biol; 2018; 1704():401-417. PubMed ID: 29277875
[TBL] [Abstract][Full Text] [Related]
19. Viral metagenome analysis to guide human pathogen monitoring in environmental samples.
Bibby K; Viau E; Peccia J
Lett Appl Microbiol; 2011 Apr; 52(4):386-92. PubMed ID: 21272046
[TBL] [Abstract][Full Text] [Related]
20. Bioinformatic Approaches for Comparative Analysis of Viruses.
Dorlass EG; Amgarten DE
Methods Mol Biol; 2024; 2802():395-425. PubMed ID: 38819566
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]