These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

448 related articles for article (PubMed ID: 28379339)

  • 21. OncoSimulR: genetic simulation with arbitrary epistasis and mutator genes in asexual populations.
    Diaz-Uriarte R
    Bioinformatics; 2017 Jun; 33(12):1898-1899. PubMed ID: 28186227
    [TBL] [Abstract][Full Text] [Related]  

  • 22. sangeranalyseR: Simple and Interactive Processing of Sanger Sequencing Data in R.
    Chao KH; Barton K; Palmer S; Lanfear R
    Genome Biol Evol; 2021 Mar; 13(3):. PubMed ID: 33591316
    [TBL] [Abstract][Full Text] [Related]  

  • 23. KEGGgraph: a graph approach to KEGG PATHWAY in R and bioconductor.
    Zhang JD; Wiemann S
    Bioinformatics; 2009 Jun; 25(11):1470-1. PubMed ID: 19307239
    [TBL] [Abstract][Full Text] [Related]  

  • 24. EpiCompare: R package for the comparison and quality control of epigenomic peak files.
    Choi S; Schilder BM; Abbasova L; Murphy AE; Skene NG
    Bioinform Adv; 2023; 3(1):vbad049. PubMed ID: 37250110
    [TBL] [Abstract][Full Text] [Related]  

  • 25. bigPint: A Bioconductor visualization package that makes big data pint-sized.
    Rutter L; Cook D
    PLoS Comput Biol; 2020 Jun; 16(6):e1007912. PubMed ID: 32542031
    [TBL] [Abstract][Full Text] [Related]  

  • 26. CompGO: an R package for comparing and visualizing Gene Ontology enrichment differences between DNA binding experiments.
    Waardenberg AJ; Basset SD; Bouveret R; Harvey RP
    BMC Bioinformatics; 2015 Sep; 16():275. PubMed ID: 26329719
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Nozzle: a report generation toolkit for data analysis pipelines.
    Gehlenborg N; Noble MS; Getz G; Chin L; Park PJ
    Bioinformatics; 2013 Apr; 29(8):1089-91. PubMed ID: 23419376
    [TBL] [Abstract][Full Text] [Related]  

  • 28. GRcalculator: an online tool for calculating and mining dose-response data.
    Clark NA; Hafner M; Kouril M; Williams EH; Muhlich JL; Pilarczyk M; Niepel M; Sorger PK; Medvedovic M
    BMC Cancer; 2017 Oct; 17(1):698. PubMed ID: 29065900
    [TBL] [Abstract][Full Text] [Related]  

  • 29. APAlyzer: a bioinformatics package for analysis of alternative polyadenylation isoforms.
    Wang R; Tian B
    Bioinformatics; 2020 Jun; 36(12):3907-3909. PubMed ID: 32321166
    [TBL] [Abstract][Full Text] [Related]  

  • 30. RNASeqR: An R Package for Automated Two-Group RNA-Seq Analysis Workflow.
    Chao KH; Hsiao YW; Lee YF; Lee CY; Lai LC; Tsai MH; Lu TP; Chuang EY
    IEEE/ACM Trans Comput Biol Bioinform; 2021; 18(5):2023-2031. PubMed ID: 31796413
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Girafe--an R/Bioconductor package for functional exploration of aligned next-generation sequencing reads.
    Toedling J; Ciaudo C; Voinnet O; Heard E; Barillot E
    Bioinformatics; 2010 Nov; 26(22):2902-3. PubMed ID: 20861030
    [TBL] [Abstract][Full Text] [Related]  

  • 32. msa: an R package for multiple sequence alignment.
    Bodenhofer U; Bonatesta E; Horejš-Kainrath C; Hochreiter S
    Bioinformatics; 2015 Dec; 31(24):3997-9. PubMed ID: 26315911
    [TBL] [Abstract][Full Text] [Related]  

  • 33. WEbcoli: an interactive and asynchronous web application for in silico design and analysis of genome-scale E.coli model.
    Jung TS; Yeo HC; Reddy SG; Cho WS; Lee DY
    Bioinformatics; 2009 Nov; 25(21):2850-2. PubMed ID: 19689960
    [TBL] [Abstract][Full Text] [Related]  

  • 34. flowDensity: reproducing manual gating of flow cytometry data by automated density-based cell population identification.
    Malek M; Taghiyar MJ; Chong L; Finak G; Gottardo R; Brinkman RR
    Bioinformatics; 2015 Feb; 31(4):606-7. PubMed ID: 25378466
    [TBL] [Abstract][Full Text] [Related]  

  • 35. HilbertCurve: an R/Bioconductor package for high-resolution visualization of genomic data.
    Gu Z; Eils R; Schlesner M
    Bioinformatics; 2016 Aug; 32(15):2372-4. PubMed ID: 27153599
    [TBL] [Abstract][Full Text] [Related]  

  • 36. VariantAnnotation: a Bioconductor package for exploration and annotation of genetic variants.
    Obenchain V; Lawrence M; Carey V; Gogarten S; Shannon P; Morgan M
    Bioinformatics; 2014 Jul; 30(14):2076-8. PubMed ID: 24681907
    [TBL] [Abstract][Full Text] [Related]  

  • 37. DiscoRhythm: an easy-to-use web application and R package for discovering rhythmicity.
    Carlucci M; Kriščiūnas A; Li H; Gibas P; Koncevičius K; Petronis A; Oh G
    Bioinformatics; 2019 Nov; 36(6):1952-4. PubMed ID: 31702788
    [TBL] [Abstract][Full Text] [Related]  

  • 38. R/Bioconductor software for Illumina's Infinium whole-genome genotyping BeadChips.
    Ritchie ME; Carvalho BS; Hetrick KN; Tavaré S; Irizarry RA
    Bioinformatics; 2009 Oct; 25(19):2621-3. PubMed ID: 19661241
    [TBL] [Abstract][Full Text] [Related]  

  • 39. rTANDEM, an R/Bioconductor package for MS/MS protein identification.
    Fournier F; Joly Beauparlant C; Paradis R; Droit A
    Bioinformatics; 2014 Aug; 30(15):2233-4. PubMed ID: 24700319
    [TBL] [Abstract][Full Text] [Related]  

  • 40. R/EBcoexpress: an empirical Bayesian framework for discovering differential co-expression.
    Dawson JA; Ye S; Kendziorski C
    Bioinformatics; 2012 Jul; 28(14):1939-40. PubMed ID: 22595207
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 23.