BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

170 related articles for article (PubMed ID: 28389727)

  • 1. The Use of Degenerate Primers in qPCR Analysis of Functional Genes Can Cause Dramatic Quantification Bias as Revealed by Investigation of nifH Primer Performance.
    Gaby JC; Buckley DH
    Microb Ecol; 2017 Oct; 74(3):701-708. PubMed ID: 28389727
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Improvement in the RFLP procedure for studying the diversity of nifH genes in communities of nitrogen fixers in soil.
    Poly F; Monrozier LJ; Bally R
    Res Microbiol; 2001; 152(1):95-103. PubMed ID: 11281330
    [TBL] [Abstract][Full Text] [Related]  

  • 3. New molecular screening tools for analysis of free-living diazotrophs in soil.
    Bürgmann H; Widmer F; Von Sigler W; Zeyer J
    Appl Environ Microbiol; 2004 Jan; 70(1):240-7. PubMed ID: 14711647
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Evaluation of PCR primers for universal nifH gene targeting and for assessment of transcribed nifH pools in roots of Oryza longistaminata with and without low nitrogen input.
    Demba Diallo M; Reinhold-Hurek B; Hurek T
    FEMS Microbiol Ecol; 2008 Aug; 65(2):220-8. PubMed ID: 18631250
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Deconstructing the polymerase chain reaction: understanding and correcting bias associated with primer degeneracies and primer-template mismatches.
    Green SJ; Venkatramanan R; Naqib A
    PLoS One; 2015; 10(5):e0128122. PubMed ID: 25996930
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The effect of multiple primer-template mismatches on quantitative PCR accuracy and development of a multi-primer set assay for accurate quantification of pcrA gene sequence variants.
    Ledeker BM; De Long SK
    J Microbiol Methods; 2013 Sep; 94(3):224-31. PubMed ID: 23806694
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Effect of primer mismatch, annealing temperature and PCR cycle number on 16S rRNA gene-targetting bacterial community analysis.
    Sipos R; Székely AJ; Palatinszky M; Révész S; Márialigeti K; Nikolausz M
    FEMS Microbiol Ecol; 2007 May; 60(2):341-50. PubMed ID: 17343679
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A comprehensive evaluation of PCR primers to amplify the nifH gene of nitrogenase.
    Gaby JC; Buckley DH
    PLoS One; 2012; 7(7):e42149. PubMed ID: 22848735
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Assessment and modification of degenerate qPCR primers that amplify functional genes from etheneotrophs and vinyl chloride-assimilators.
    Jin YO; Mattes TE
    Lett Appl Microbiol; 2011 Nov; 53(5):576-80. PubMed ID: 21880051
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Metagenome complexity and template length are the main causes of bias in PCR-based bacteria community analysis.
    Peng W; Li X; Wang C; Cao H; Cui Z
    J Basic Microbiol; 2018 Nov; 58(11):987-997. PubMed ID: 30091475
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Cloning of prokaryotic genes by a universal degenerate primer PCR.
    Ping L; Vogel H; Boland W
    FEMS Microbiol Lett; 2008 Oct; 287(2):192-8. PubMed ID: 18721147
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Evaluation of quantitative polymerase chain reaction to assess nosZ gene prevalence in mixed microbial communities.
    Siciliano SD; Ma W; Powell S
    Can J Microbiol; 2007 May; 53(5):636-42. PubMed ID: 17668022
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Bias in template-to-product ratios in multitemplate PCR.
    Polz MF; Cavanaugh CM
    Appl Environ Microbiol; 1998 Oct; 64(10):3724-30. PubMed ID: 9758791
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Evaluation of revised polymerase chain reaction primers for more inclusive quantification of ammonia-oxidizing archaea and bacteria.
    Meinhardt KA; Bertagnolli A; Pannu MW; Strand SE; Brown SL; Stahl DA
    Environ Microbiol Rep; 2015 Apr; 7(2):354-63. PubMed ID: 25534249
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Effect of target gene sequence evenness and dominance on real-time PCR quantification of artificial sulfate-reducing microbial communities.
    Du Z; Behrens SF
    PLoS One; 2024; 19(3):e0299930. PubMed ID: 38452018
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Comparison of different primer sets for use in automated ribosomal intergenic spacer analysis of complex bacterial communities.
    Cardinale M; Brusetti L; Quatrini P; Borin S; Puglia AM; Rizzi A; Zanardini E; Sorlini C; Corselli C; Daffonchio D
    Appl Environ Microbiol; 2004 Oct; 70(10):6147-56. PubMed ID: 15466561
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Enzymological description of multitemplate PCR-Shrinking amplification bias by optimizing the polymerase-template ratio.
    Ingr M; Dostál J; Majerová T
    J Theor Biol; 2015 Oct; 382():178-86. PubMed ID: 26164060
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Quantification of Frankia in soils using SYBR Green based qPCR.
    Samant S; Sha Q; Iyer A; Dhabekar P; Hahn D
    Syst Appl Microbiol; 2012 May; 35(3):191-7. PubMed ID: 22326815
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Deconstructing the Polymerase Chain Reaction II: an improved workflow and effects on artifact formation and primer degeneracy.
    Naqib A; Poggi S; Green SJ
    PeerJ; 2019; 7():e7121. PubMed ID: 31231597
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A novel metric to improve mismatched primer selection and quantification accuracy in amplifying DNA repeats for quantitative polymerase chain reactions.
    Xu EY; Schneper LM; Notterman DA
    PLoS One; 2023; 18(10):e0292559. PubMed ID: 37812635
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.