These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

134 related articles for article (PubMed ID: 28400233)

  • 1. Identification of acylation products in SHAPE chemistry.
    Lin C; Poyer S; Zargarian L; Salpin JY; Fossé P; Mauffret O; Xie J
    Bioorg Med Chem Lett; 2017 Jun; 27(11):2506-2509. PubMed ID: 28400233
    [TBL] [Abstract][Full Text] [Related]  

  • 2. RNA SHAPE chemistry with aromatic acylating reagents.
    Nodin L; Noël O; Chaminade F; Maskri O; Barbier V; David O; Fossé P; Xie J
    Bioorg Med Chem Lett; 2015 Feb; 25(3):566-70. PubMed ID: 25557357
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Selective 2'-hydroxyl acylation analyzed by primer extension (SHAPE): quantitative RNA structure analysis at single nucleotide resolution.
    Wilkinson KA; Merino EJ; Weeks KM
    Nat Protoc; 2006; 1(3):1610-6. PubMed ID: 17406453
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Electrospray ionization and collision-induced dissociation tandem mass spectrometric discrimination of polyphenolic glycosides: exact acylation site determination of the O-acylated monosaccharide residues.
    Liao SG; Zhang LJ; Wang Z; Sun F; Li YJ; Wang AM; Huang Y; Lan YY; Wang YL
    Rapid Commun Mass Spectrom; 2012 Nov; 26(21):2483-92. PubMed ID: 23008065
    [TBL] [Abstract][Full Text] [Related]  

  • 5. SHAMS: combining chemical modification of RNA with mass spectrometry to examine polypurine tract-containing RNA/DNA hybrids.
    Turner KB; Yi-Brunozzi HY; Brinson RG; Marino JP; Fabris D; Le Grice SF
    RNA; 2009 Aug; 15(8):1605-13. PubMed ID: 19535461
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The mechanisms of RNA SHAPE chemistry.
    McGinnis JL; Dunkle JA; Cate JH; Weeks KM
    J Am Chem Soc; 2012 Apr; 134(15):6617-24. PubMed ID: 22475022
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Determination of RNA Structure with In Vitro SHAPE Experiments.
    Baes R; Charlier D; Peeters E
    Methods Mol Biol; 2022; 2516():259-290. PubMed ID: 35922631
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Influence of nucleotide identity on ribose 2'-hydroxyl reactivity in RNA.
    Wilkinson KA; Vasa SM; Deigan KE; Mortimer SA; Giddings MC; Weeks KM
    RNA; 2009 Jul; 15(7):1314-21. PubMed ID: 19458034
    [TBL] [Abstract][Full Text] [Related]  

  • 9. RNA structure analysis at single nucleotide resolution by selective 2'-hydroxyl acylation and primer extension (SHAPE).
    Merino EJ; Wilkinson KA; Coughlan JL; Weeks KM
    J Am Chem Soc; 2005 Mar; 127(12):4223-31. PubMed ID: 15783204
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Mapping RNA Structure In Vitro with SHAPE Chemistry and Next-Generation Sequencing (SHAPE-Seq).
    Watters KE; Lucks JB
    Methods Mol Biol; 2016; 1490():135-62. PubMed ID: 27665597
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Local RNA structural changes induced by crystallization are revealed by SHAPE.
    Vicens Q; Gooding AR; Laederach A; Cech TR
    RNA; 2007 Apr; 13(4):536-48. PubMed ID: 17299128
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Exploring RNA structural codes with SHAPE chemistry.
    Weeks KM; Mauger DM
    Acc Chem Res; 2011 Dec; 44(12):1280-91. PubMed ID: 21615079
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Analysis of the RNA backbone: structural analysis of riboswitches by in-line probing and selective 2'-hydroxyl acylation and primer extension.
    Wakeman CA; Winkler WC
    Methods Mol Biol; 2009; 540():173-91. PubMed ID: 19381560
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Time-resolved RNA SHAPE chemistry: quantitative RNA structure analysis in one-second snapshots and at single-nucleotide resolution.
    Mortimer SA; Weeks KM
    Nat Protoc; 2009; 4(10):1413-21. PubMed ID: 19745823
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Selective 2'-hydroxyl acylation analyzed by primer extension and mutational profiling (SHAPE-MaP) for direct, versatile and accurate RNA structure analysis.
    Smola MJ; Rice GM; Busan S; Siegfried NA; Weeks KM
    Nat Protoc; 2015 Nov; 10(11):1643-69. PubMed ID: 26426499
    [TBL] [Abstract][Full Text] [Related]  

  • 16. SHAPE to Probe RNA Structure and RNA-Protein Interactions In Vitro.
    Saha K; Ghosh G
    Methods Mol Biol; 2023; 2666():69-80. PubMed ID: 37166657
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The interplay between molecular flexibility and RNA chemical probing reactivities analyzed at the nucleotide level via an extensive molecular dynamics study.
    Frezza E; Courban A; Allouche D; Sargueil B; Pasquali S
    Methods; 2019 Jun; 162-163():108-127. PubMed ID: 31145972
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Use of SHAPE to select 2AP substitution sites for RNA-ligand interactions and dynamics studies.
    Soulière MF; Micura R
    Methods Mol Biol; 2014; 1103():227-39. PubMed ID: 24318898
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Selective 2'-hydroxyl acylation analyzed by protection from exoribonuclease.
    Steen KA; Malhotra A; Weeks KM
    J Am Chem Soc; 2010 Jul; 132(29):9940-3. PubMed ID: 20597503
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Screening of synthetic PDE-5 inhibitors and their analogues as adulterants: analytical techniques and challenges.
    Patel DN; Li L; Kee CL; Ge X; Low MY; Koh HL
    J Pharm Biomed Anal; 2014 Jan; 87():176-90. PubMed ID: 23721687
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.