180 related articles for article (PubMed ID: 28402876)
1. Mechanistic Models Fit to Variable Temperature Calorimetric Data Provide Insights into Cooperativity.
Ihms EC; Kleckner IR; Gollnick P; Foster MP
Biophys J; 2017 Apr; 112(7):1328-1338. PubMed ID: 28402876
[TBL] [Abstract][Full Text] [Related]
2. Population Distributions from Native Mass Spectrometry Titrations Reveal Nearest-Neighbor Cooperativity in the Ring-Shaped Oligomeric Protein TRAP.
Holmquist ML; Ihms EC; Gollnick P; Wysocki VH; Foster MP
Biochemistry; 2020 Jul; 59(27):2518-2527. PubMed ID: 32558551
[TBL] [Abstract][Full Text] [Related]
3. Dynamic allostery in the ring protein TRAP.
Heddle JG; Okajima T; Scott DJ; Akashi S; Park SY; Tame JR
J Mol Biol; 2007 Aug; 371(1):154-67. PubMed ID: 17559872
[TBL] [Abstract][Full Text] [Related]
4. Thermodynamic coupling between neighboring binding sites in homo-oligomeric ligand sensing proteins from mass resolved ligand-dependent population distributions.
Li W; Norris AS; Lichtenthal K; Kelly S; Ihms EC; Gollnick P; Wysocki VH; Foster MP
Protein Sci; 2022 Oct; 31(10):e4424. PubMed ID: 36173171
[TBL] [Abstract][Full Text] [Related]
5. TROSY-NMR studies of the 91kDa TRAP protein reveal allosteric control of a gene regulatory protein by ligand-altered flexibility.
McElroy C; Manfredo A; Wendt A; Gollnick P; Foster M
J Mol Biol; 2002 Oct; 323(3):463-73. PubMed ID: 12381302
[TBL] [Abstract][Full Text] [Related]
6. Thermodynamics of tryptophan-mediated activation of the trp RNA-binding attenuation protein.
McElroy CA; Manfredo A; Gollnick P; Foster MP
Biochemistry; 2006 Jun; 45(25):7844-53. PubMed ID: 16784236
[TBL] [Abstract][Full Text] [Related]
7. Homotropic cooperativity from the activation pathway of the allosteric ligand-responsive regulatory trp RNA-binding attenuation protein.
Kleckner IR; McElroy CA; Kuzmic P; Gollnick P; Foster MP
Biochemistry; 2013 Dec; 52(49):8855-65. PubMed ID: 24224873
[TBL] [Abstract][Full Text] [Related]
8. Analysis of the binding of ligands to large numbers of sites: the binding of tryptophan to the 11 sites of the trp RNA-binding attenuation protein.
Saroff HA; Kiefer JE
Anal Biochem; 1997 Apr; 247(1):138-42. PubMed ID: 9126383
[TBL] [Abstract][Full Text] [Related]
9. Mechanisms of allosteric gene regulation by NMR quantification of microsecond-millisecond protein dynamics.
Kleckner IR; Gollnick P; Foster MP
J Mol Biol; 2012 Jan; 415(2):372-81. PubMed ID: 22115774
[TBL] [Abstract][Full Text] [Related]
10. Collecting variable-concentration isothermal titration calorimetry datasets in order to determine binding mechanisms.
Freiburger LA; Mittermaier AK; Auclair K
J Vis Exp; 2011 Apr; (50):. PubMed ID: 21505408
[TBL] [Abstract][Full Text] [Related]
11. Insights into activation and RNA binding of trp RNA-binding attenuation protein (TRAP) through all-atom simulations.
Murtola T; Vattulainen I; Falck E
Proteins; 2008 Jun; 71(4):1995-2011. PubMed ID: 18186477
[TBL] [Abstract][Full Text] [Related]
12. On the link between conformational changes, ligand binding and heat capacity.
Vega S; Abian O; Velazquez-Campoy A
Biochim Biophys Acta; 2016 May; 1860(5):868-878. PubMed ID: 26476135
[TBL] [Abstract][Full Text] [Related]
13. Dissecting the thermodynamics and cooperativity of ligand binding in cytochrome P450eryF.
Muralidhara BK; Negi SS; Halpert JR
J Am Chem Soc; 2007 Feb; 129(7):2015-24. PubMed ID: 17256854
[TBL] [Abstract][Full Text] [Related]
14. Isothermal titration calorimetry: general formalism using binding polynomials.
Freire E; Schön A; Velazquez-Campoy A
Methods Enzymol; 2009; 455():127-55. PubMed ID: 19289205
[TBL] [Abstract][Full Text] [Related]
15. Crystal structure of unliganded TRAP: implications for dynamic allostery.
Malay AD; Watanabe M; Heddle JG; Tame JR
Biochem J; 2011 Mar; 434(3):427-34. PubMed ID: 21175426
[TBL] [Abstract][Full Text] [Related]
16. Thermodynamic analysis of small ligand binding to the Escherichia coli repressor of biotin biosynthesis.
Xu Y; Johnson CR; Beckett D
Biochemistry; 1996 Apr; 35(17):5509-17. PubMed ID: 8611542
[TBL] [Abstract][Full Text] [Related]
17. Global ITC fitting methods in studies of protein allostery.
Freiburger L; Auclair K; Mittermaier A
Methods; 2015 Apr; 76():149-161. PubMed ID: 25573261
[TBL] [Abstract][Full Text] [Related]
18. Exact analysis of heterotropic interactions in proteins: Characterization of cooperative ligand binding by isothermal titration calorimetry.
Velazquez-Campoy A; Goñi G; Peregrina JR; Medina M
Biophys J; 2006 Sep; 91(5):1887-904. PubMed ID: 16766617
[TBL] [Abstract][Full Text] [Related]
19. Synergy of molecular dynamics and isothermal titration calorimetry in studies of allostery.
Strawn R; Stockner T; Melichercik M; Jin L; Xue WF; Carey J; Ettrich R
Methods Enzymol; 2011; 492():151-88. PubMed ID: 21333791
[TBL] [Abstract][Full Text] [Related]
20. Interaction of the 11-subunit trp RNA-binding attenuation protein (TRAP) with its RNA target.
Gollnick P; Baumann C; Yang M; Otridge J; Antson A
Nucleic Acids Symp Ser; 1995; (33):43-5. PubMed ID: 8643393
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
