204 related articles for article (PubMed ID: 28406749)
1. Nucleosome repositioning during differentiation of a human myeloid leukemia cell line.
Teif VB; Mallm JP; Sharma T; Mark Welch DB; Rippe K; Eils R; Langowski J; Olins AL; Olins DE
Nucleus; 2017 Mar; 8(2):188-204. PubMed ID: 28406749
[TBL] [Abstract][Full Text] [Related]
2. Nucleosome reorganisation in breast cancer tissues.
Jacob DR; Guiblet WM; Mamayusupova H; Shtumpf M; Ciuta I; Ruje L; Gretton S; Bikova M; Correa C; Dellow E; Agrawal SP; Shafiei N; Drobysevskaja A; Armstrong CM; Lam JDG; Vainshtein Y; Clarkson CT; Thorn GJ; Sohn K; Pradeepa MM; Chandrasekharan S; Brooke GN; Klenova E; Zhurkin VB; Teif VB
Clin Epigenetics; 2024 Apr; 16(1):50. PubMed ID: 38561804
[TBL] [Abstract][Full Text] [Related]
3. Multiple distinct stimuli increase measured nucleosome occupancy around human promoters.
Pham CD; Sims HI; Archer TK; Schnitzler GR
PLoS One; 2011; 6(8):e23490. PubMed ID: 21853138
[TBL] [Abstract][Full Text] [Related]
4. BAF250a Protein Regulates Nucleosome Occupancy and Histone Modifications in Priming Embryonic Stem Cell Differentiation.
Lei I; West J; Yan Z; Gao X; Fang P; Dennis JH; Gnatovskiy L; Wang W; Kingston RE; Wang Z
J Biol Chem; 2015 Jul; 290(31):19343-52. PubMed ID: 26070559
[TBL] [Abstract][Full Text] [Related]
5. Nucleosome Organization in Human Embryonic Stem Cells.
Yazdi PG; Pedersen BA; Taylor JF; Khattab OS; Chen YH; Chen Y; Jacobsen SE; Wang PH
PLoS One; 2015; 10(8):e0136314. PubMed ID: 26305225
[TBL] [Abstract][Full Text] [Related]
6. Genome-wide nucleosome positioning during embryonic stem cell development.
Teif VB; Vainshtein Y; Caudron-Herger M; Mallm JP; Marth C; Höfer T; Rippe K
Nat Struct Mol Biol; 2012 Nov; 19(11):1185-92. PubMed ID: 23085715
[TBL] [Abstract][Full Text] [Related]
7. A novel method to predict regulatory regions based on histone mark landscapes in macrophages.
Nagy G; Dániel B; Jónás D; Nagy L; Barta E
Immunobiology; 2013 Nov; 218(11):1416-27. PubMed ID: 23973299
[TBL] [Abstract][Full Text] [Related]
8. Unbiased chromatin accessibility profiling by RED-seq uncovers unique features of nucleosome variants in vivo.
Chen PB; Zhu LJ; Hainer SJ; McCannell KN; Fazzio TG
BMC Genomics; 2014 Dec; 15(1):1104. PubMed ID: 25494698
[TBL] [Abstract][Full Text] [Related]
9. A novel mechanism of epigenetic regulation: nucleosome-space occupancy.
Cui P; Zhang L; Lin Q; Ding F; Xin C; Fang X; Hu S; Yu J
Biochem Biophys Res Commun; 2010 Jan; 391(1):884-9. PubMed ID: 19948147
[TBL] [Abstract][Full Text] [Related]
10. Nucleosome repositioning underlies dynamic gene expression.
Nocetti N; Whitehouse I
Genes Dev; 2016 Mar; 30(6):660-72. PubMed ID: 26966245
[TBL] [Abstract][Full Text] [Related]
11. Enhancer regions show high histone H3.3 turnover that changes during differentiation.
Deaton AM; Gómez-Rodríguez M; Mieczkowski J; Tolstorukov MY; Kundu S; Sadreyev RI; Jansen LE; Kingston RE
Elife; 2016 Jun; 5():. PubMed ID: 27304074
[TBL] [Abstract][Full Text] [Related]
12. Ubiquitous human 'master' origins of replication are encoded in the DNA sequence via a local enrichment in nucleosome excluding energy barriers.
Drillon G; Audit B; Argoul F; Arneodo A
J Phys Condens Matter; 2015 Feb; 27(6):064102. PubMed ID: 25563930
[TBL] [Abstract][Full Text] [Related]
13. H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions.
Jin C; Zang C; Wei G; Cui K; Peng W; Zhao K; Felsenfeld G
Nat Genet; 2009 Aug; 41(8):941-5. PubMed ID: 19633671
[TBL] [Abstract][Full Text] [Related]
14. Histone H3 phosphorylation in human monocytes and during HL-60 cell differentiation.
Juan G; Traganos F; Darzynkiewicz Z
Exp Cell Res; 1999 Jan; 246(1):212-20. PubMed ID: 9882530
[TBL] [Abstract][Full Text] [Related]
15. Histone H3 acetylated at lysine 9 in promoter is associated with low nucleosome density in the vicinity of transcription start site in human cell.
Nishida H; Suzuki T; Kondo S; Miura H; Fujimura Y; Hayashizaki Y
Chromosome Res; 2006; 14(2):203-11. PubMed ID: 16544193
[TBL] [Abstract][Full Text] [Related]
16. Nucleosome repositioning in chronic lymphocytic leukemia.
Piroeva KV; McDonald C; Xanthopoulos C; Fox C; Clarkson CT; Mallm JP; Vainshtein Y; Ruje L; Klett LC; Stilgenbauer S; Mertens D; Kostareli E; Rippe K; Teif VB
Genome Res; 2023 Oct; 33(10):1649-1661. PubMed ID: 37699659
[TBL] [Abstract][Full Text] [Related]
17. Dynamically reorganized chromatin is the key for the reprogramming of somatic cells to pluripotent cells.
Huang K; Zhang X; Shi J; Yao M; Lin J; Li J; Liu H; Li H; Shi G; Wang Z; Zhang B; Chen J; Pan G; Jiang C; Pei D; Yao H
Sci Rep; 2015 Dec; 5():17691. PubMed ID: 26639176
[TBL] [Abstract][Full Text] [Related]
18. Dissecting epigenetic silencing complexity in the mouse lung cancer suppressor gene Cadm1.
Reamon-Buettner SM; Borlak J
PLoS One; 2012; 7(6):e38531. PubMed ID: 22701659
[TBL] [Abstract][Full Text] [Related]
19. CTCF-dependent chromatin boundaries formed by asymmetric nucleosome arrays with decreased linker length.
Clarkson CT; Deeks EA; Samarista R; Mamayusupova H; Zhurkin VB; Teif VB
Nucleic Acids Res; 2019 Dec; 47(21):11181-11196. PubMed ID: 31665434
[TBL] [Abstract][Full Text] [Related]
20. Nucleosome dynamics during chromatin remodeling in vivo.
Ramachandran S; Henikoff S
Nucleus; 2016; 7(1):20-6. PubMed ID: 26933790
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]