433 related articles for article (PubMed ID: 28410363)
1. Highly accessible AU-rich regions in 3' untranslated regions are hotspots for binding of regulatory factors.
Plass M; Rasmussen SH; Krogh A
PLoS Comput Biol; 2017 Apr; 13(4):e1005460. PubMed ID: 28410363
[TBL] [Abstract][Full Text] [Related]
2. Modeling the combined effect of RNA-binding proteins and microRNAs in post-transcriptional regulation.
HafezQorani S; Lafzi A; de Bruin RG; van Zonneveld AJ; van der Veer EP; Son YA; Kazan H
Nucleic Acids Res; 2016 May; 44(9):e83. PubMed ID: 26837572
[TBL] [Abstract][Full Text] [Related]
3. Evolution of Hox post-transcriptional regulation by alternative polyadenylation and microRNA modulation within 12 Drosophila genomes.
Patraquim P; Warnefors M; Alonso CR
Mol Biol Evol; 2011 Sep; 28(9):2453-60. PubMed ID: 21436120
[TBL] [Abstract][Full Text] [Related]
4. Reprogramming of 3' untranslated regions of mRNAs by alternative polyadenylation in generation of pluripotent stem cells from different cell types.
Ji Z; Tian B
PLoS One; 2009 Dec; 4(12):e8419. PubMed ID: 20037631
[TBL] [Abstract][Full Text] [Related]
5. PTRE-seq reveals mechanism and interactions of RNA binding proteins and miRNAs.
Cottrell KA; Chaudhari HG; Cohen BA; Djuranovic S
Nat Commun; 2018 Jan; 9(1):301. PubMed ID: 29352242
[TBL] [Abstract][Full Text] [Related]
6. Transcriptome-wide analysis reveals spatial correlation between N6-methyladenosine and binding sites of microRNAs and RNA-binding proteins.
Das Mandal S; Ray PS
Genomics; 2021 Jan; 113(1 Pt 1):205-216. PubMed ID: 33340693
[TBL] [Abstract][Full Text] [Related]
7. 3'READS + RIP defines differential Staufen1 binding to alternative 3'UTR isoforms and reveals structures and sequence motifs influencing binding and polysome association.
Zheng D; Cho H; Wang W; Rambout X; Tian B; Maquat LE
RNA; 2020 Nov; 26(11):1621-1636. PubMed ID: 32796083
[TBL] [Abstract][Full Text] [Related]
8. Antagonistic and cooperative AGO2-PUM interactions in regulating mRNAs.
Sternburg EL; Estep JA; Nguyen DK; Li Y; Karginov FV
Sci Rep; 2018 Oct; 8(1):15316. PubMed ID: 30333515
[TBL] [Abstract][Full Text] [Related]
9. A deep boosting based approach for capturing the sequence binding preferences of RNA-binding proteins from high-throughput CLIP-seq data.
Li S; Dong F; Wu Y; Zhang S; Zhang C; Liu X; Jiang T; Zeng J
Nucleic Acids Res; 2017 Aug; 45(14):e129. PubMed ID: 28575488
[TBL] [Abstract][Full Text] [Related]
10. Formation, regulation and evolution of Caenorhabditis elegans 3'UTRs.
Jan CH; Friedman RC; Ruby JG; Bartel DP
Nature; 2011 Jan; 469(7328):97-101. PubMed ID: 21085120
[TBL] [Abstract][Full Text] [Related]
11. Alternative polyadenylation confers Pten mRNAs stability and resistance to microRNAs.
Thivierge C; Tseng HW; Mayya VK; Lussier C; Gravel SP; Duchaine TF
Nucleic Acids Res; 2018 Nov; 46(19):10340-10352. PubMed ID: 30053103
[TBL] [Abstract][Full Text] [Related]
12. Microarray meta-analysis of RNA-binding protein functions in alternative polyadenylation.
Hu W; Liu Y; Yan J
PLoS One; 2014; 9(3):e90774. PubMed ID: 24622240
[TBL] [Abstract][Full Text] [Related]
13. PAR-CliP--a method to identify transcriptome-wide the binding sites of RNA binding proteins.
Hafner M; Landthaler M; Burger L; Khorshid M; Hausser J; Berninger P; Rothballer A; Ascano M; Jungkamp AC; Munschauer M; Ulrich A; Wardle GS; Dewell S; Zavolan M; Tuschl T
J Vis Exp; 2010 Jul; (41):. PubMed ID: 20644507
[TBL] [Abstract][Full Text] [Related]
14. Translating the Untranslated Region.
Schwerk J; Savan R
J Immunol; 2015 Oct; 195(7):2963-71. PubMed ID: 26386038
[TBL] [Abstract][Full Text] [Related]
15. Human protein-RNA interaction network is highly stable across mammals.
Ramakrishnan A; Janga SC
BMC Genomics; 2019 Dec; 20(Suppl 12):1004. PubMed ID: 31888461
[TBL] [Abstract][Full Text] [Related]
16. A comprehensive analysis of 3' end sequencing data sets reveals novel polyadenylation signals and the repressive role of heterogeneous ribonucleoprotein C on cleavage and polyadenylation.
Gruber AJ; Schmidt R; Gruber AR; Martin G; Ghosh S; Belmadani M; Keller W; Zavolan M
Genome Res; 2016 Aug; 26(8):1145-59. PubMed ID: 27382025
[TBL] [Abstract][Full Text] [Related]
17. Tandem RNA isolation reveals functional rearrangement of RNA-binding proteins on
Iadevaia V; Wouters MD; Kanitz A; Matia-González AM; Laing EE; Gerber AP
RNA Biol; 2020 Jan; 17(1):33-46. PubMed ID: 31522610
[TBL] [Abstract][Full Text] [Related]
18. Herpesvirus saimiri MicroRNAs Preferentially Target Host Cell Cycle Regulators.
Guo YE; Oei T; Steitz JA
J Virol; 2015 Nov; 89(21):10901-11. PubMed ID: 26292323
[TBL] [Abstract][Full Text] [Related]
19. The role of the 3' untranslated region in post-transcriptional regulation of protein expression in mammalian cells.
Matoulkova E; Michalova E; Vojtesek B; Hrstka R
RNA Biol; 2012 May; 9(5):563-76. PubMed ID: 22614827
[TBL] [Abstract][Full Text] [Related]
20. Characterization and Functional Analysis of Polyadenylation Sites in Fast and Slow Muscles.
Deng L; Li L; Zou C; Fang C; Li C
Biomed Res Int; 2020; 2020():2626584. PubMed ID: 32258109
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
