460 related articles for article (PubMed ID: 28412515)
1. Genome-wide determination of transcription start sites reveals new insights into promoter structures in the actinomycete Corynebacterium glutamicum.
Albersmeier A; Pfeifer-Sancar K; Rückert C; Kalinowski J
J Biotechnol; 2017 Sep; 257():99-109. PubMed ID: 28412515
[TBL] [Abstract][Full Text] [Related]
2. Genome-wide prediction and validation of sigma70 promoters in Lactobacillus plantarum WCFS1.
Todt TJ; Wels M; Bongers RS; Siezen RS; van Hijum SA; Kleerebezem M
PLoS One; 2012; 7(9):e45097. PubMed ID: 23028780
[TBL] [Abstract][Full Text] [Related]
3. Transcriptome sequencing of the human pathogen Corynebacterium diphtheriae NCTC 13129 provides detailed insights into its transcriptional landscape and into DtxR-mediated transcriptional regulation.
Wittchen M; Busche T; Gaspar AH; Lee JH; Ton-That H; Kalinowski J; Tauch A
BMC Genomics; 2018 Jan; 19(1):82. PubMed ID: 29370758
[TBL] [Abstract][Full Text] [Related]
4. TSS-EMOTE, a refined protocol for a more complete and less biased global mapping of transcription start sites in bacterial pathogens.
Prados J; Linder P; Redder P
BMC Genomics; 2016 Nov; 17(1):849. PubMed ID: 27806702
[TBL] [Abstract][Full Text] [Related]
5. Transcriptome analysis of thermophilic methylotrophic Bacillus methanolicus MGA3 using RNA-sequencing provides detailed insights into its previously uncharted transcriptional landscape.
Irla M; Neshat A; Brautaset T; Rückert C; Kalinowski J; Wendisch VF
BMC Genomics; 2015 Feb; 16(1):73. PubMed ID: 25758049
[TBL] [Abstract][Full Text] [Related]
6. Genome-wide identification of transcriptional start sites in the haloarchaeon Haloferax volcanii based on differential RNA-Seq (dRNA-Seq).
Babski J; Haas KA; Näther-Schindler D; Pfeiffer F; Förstner KU; Hammelmann M; Hilker R; Becker A; Sharma CM; Marchfelder A; Soppa J
BMC Genomics; 2016 Aug; 17(1):629. PubMed ID: 27519343
[TBL] [Abstract][Full Text] [Related]
7. Comprehensive analysis of the Corynebacterium glutamicum transcriptome using an improved RNAseq technique.
Pfeifer-Sancar K; Mentz A; Rückert C; Kalinowski J
BMC Genomics; 2013 Dec; 14():888. PubMed ID: 24341750
[TBL] [Abstract][Full Text] [Related]
8. The alternative sigma factor SigB of Corynebacterium glutamicum modulates global gene expression during transition from exponential growth to stationary phase.
Larisch C; Nakunst D; Hüser AT; Tauch A; Kalinowski J
BMC Genomics; 2007 Jan; 8():4. PubMed ID: 17204139
[TBL] [Abstract][Full Text] [Related]
9. Analysis of Corynebacterium glutamicum promoters and their applications.
Nešvera J; Holátko J; Pátek M
Subcell Biochem; 2012; 64():203-21. PubMed ID: 23080252
[TBL] [Abstract][Full Text] [Related]
10. Sigma factors and promoters in Corynebacterium glutamicum.
Pátek M; Nešvera J
J Biotechnol; 2011 Jul; 154(2-3):101-13. PubMed ID: 21277915
[TBL] [Abstract][Full Text] [Related]
11. Genome-wide analysis of core promoter structures in Schizosaccharomyces pombe with DeepCAGE.
Li H; Hou J; Bai L; Hu C; Tong P; Kang Y; Zhao X; Shao Z
RNA Biol; 2015; 12(5):525-37. PubMed ID: 25747261
[TBL] [Abstract][Full Text] [Related]
12. Construction of in vitro transcription system for Corynebacterium glutamicum and its use in the recognition of promoters of different classes.
Holátko J; Silar R; Rabatinová A; Sanderová H; Halada P; Nešvera J; Krásný L; Pátek M
Appl Microbiol Biotechnol; 2012 Oct; 96(2):521-9. PubMed ID: 22885668
[TBL] [Abstract][Full Text] [Related]
13. Use of In Vitro Transcription System for Analysis of Corynebacterium glutamicum Promoters Recognized by Two Sigma Factors.
Šilar R; Holátko J; Rucká L; Rapoport A; Dostálová H; Kadeřábková P; Nešvera J; Pátek M
Curr Microbiol; 2016 Sep; 73(3):401-408. PubMed ID: 27270733
[TBL] [Abstract][Full Text] [Related]
14. Transcriptional regulation of the operon encoding stress-responsive ECF sigma factor SigH and its anti-sigma factor RshA, and control of its regulatory network in Corynebacterium glutamicum.
Busche T; Silar R; Pičmanová M; Pátek M; Kalinowski J
BMC Genomics; 2012 Sep; 13():445. PubMed ID: 22943411
[TBL] [Abstract][Full Text] [Related]
15. Global mapping of transcription start sites and promoter motifs in the symbiotic α-proteobacterium Sinorhizobium meliloti 1021.
Schlüter JP; Reinkensmeier J; Barnett MJ; Lang C; Krol E; Giegerich R; Long SR; Becker A
BMC Genomics; 2013 Mar; 14():156. PubMed ID: 23497287
[TBL] [Abstract][Full Text] [Related]
16. Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulation.
Čuklina J; Hahn J; Imakaev M; Omasits U; Förstner KU; Ljubimov N; Goebel M; Pessi G; Fischer HM; Ahrens CH; Gelfand MS; Evguenieva-Hackenberg E
BMC Genomics; 2016 Apr; 17():302. PubMed ID: 27107716
[TBL] [Abstract][Full Text] [Related]
17. Expanding the regulatory network governed by the extracytoplasmic function sigma factor σH in Corynebacterium glutamicum.
Toyoda K; Teramoto H; Yukawa H; Inui M
J Bacteriol; 2015 Feb; 197(3):483-96. PubMed ID: 25404703
[TBL] [Abstract][Full Text] [Related]
18. RNAseq analysis of α-proteobacterium Gluconobacter oxydans 621H.
Kranz A; Busche T; Vogel A; Usadel B; Kalinowski J; Bott M; Polen T
BMC Genomics; 2018 Jan; 19(1):24. PubMed ID: 29304737
[TBL] [Abstract][Full Text] [Related]
19. High-throughput detection of RNA processing in bacteria.
Gill EE; Chan LS; Winsor GL; Dobson N; Lo R; Ho Sui SJ; Dhillon BK; Taylor PK; Shrestha R; Spencer C; Hancock REW; Unrau PJ; Brinkman FSL
BMC Genomics; 2018 Mar; 19(1):223. PubMed ID: 29587634
[TBL] [Abstract][Full Text] [Related]
20. Transcriptome sequencing revealed the transcriptional organization at ribosome-mediated attenuation sites in Corynebacterium glutamicum and identified a novel attenuator involved in aromatic amino acid biosynthesis.
Neshat A; Mentz A; Rückert C; Kalinowski J
J Biotechnol; 2014 Nov; 190():55-63. PubMed ID: 24910972
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]