446 related articles for article (PubMed ID: 28420692)
1. An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations.
Clavijo BJ; Venturini L; Schudoma C; Accinelli GG; Kaithakottil G; Wright J; Borrill P; Kettleborough G; Heavens D; Chapman H; Lipscombe J; Barker T; Lu FH; McKenzie N; Raats D; Ramirez-Gonzalez RH; Coince A; Peel N; Percival-Alwyn L; Duncan O; Trösch J; Yu G; Bolser DM; Namaati G; Kerhornou A; Spannagl M; Gundlach H; Haberer G; Davey RP; Fosker C; Palma FD; Phillips AL; Millar AH; Kersey PJ; Uauy C; Krasileva KV; Swarbreck D; Bevan MW; Clark MD
Genome Res; 2017 May; 27(5):885-896. PubMed ID: 28420692
[TBL] [Abstract][Full Text] [Related]
2. The first near-complete assembly of the hexaploid bread wheat genome, Triticum aestivum.
Zimin AV; Puiu D; Hall R; Kingan S; Clavijo BJ; Salzberg SL
Gigascience; 2017 Nov; 6(11):1-7. PubMed ID: 29069494
[TBL] [Abstract][Full Text] [Related]
3. Independent assessment and improvement of wheat genome sequence assemblies using Fosill jumping libraries.
Lu FH; McKenzie N; Kettleborough G; Heavens D; Clark MD; Bevan MW
Gigascience; 2018 May; 7(5):. PubMed ID: 29762659
[TBL] [Abstract][Full Text] [Related]
4. Chromosome-Scale Assembly of the Bread Wheat Genome Reveals Thousands of Additional Gene Copies.
Alonge M; Shumate A; Puiu D; Zimin AV; Salzberg SL
Genetics; 2020 Oct; 216(2):599-608. PubMed ID: 32796007
[TBL] [Abstract][Full Text] [Related]
5. Transcriptome-scale homoeolog-specific transcript assemblies of bread wheat.
Schreiber AW; Hayden MJ; Forrest KL; Kong SL; Langridge P; Baumann U
BMC Genomics; 2012 Sep; 13():492. PubMed ID: 22989011
[TBL] [Abstract][Full Text] [Related]
6. A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome.
International Wheat Genome Sequencing Consortium (IWGSC)
Science; 2014 Jul; 345(6194):1251788. PubMed ID: 25035500
[TBL] [Abstract][Full Text] [Related]
7. A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome.
Chapman JA; Mascher M; Buluç A; Barry K; Georganas E; Session A; Strnadova V; Jenkins J; Sehgal S; Oliker L; Schmutz J; Yelick KA; Scholz U; Waugh R; Poland JA; Muehlbauer GJ; Stein N; Rokhsar DS
Genome Biol; 2015 Jan; 16(1):26. PubMed ID: 25637298
[TBL] [Abstract][Full Text] [Related]
8. Chromosome arm-specific BAC end sequences permit comparative analysis of homoeologous chromosomes and genomes of polyploid wheat.
Sehgal SK; Li W; Rabinowicz PD; Chan A; Simková H; Doležel J; Gill BS
BMC Plant Biol; 2012 May; 12():64. PubMed ID: 22559868
[TBL] [Abstract][Full Text] [Related]
9. Genome interplay in the grain transcriptome of hexaploid bread wheat.
Pfeifer M; Kugler KG; Sandve SR; Zhan B; Rudi H; Hvidsten TR; ; Mayer KF; Olsen OA
Science; 2014 Jul; 345(6194):1250091. PubMed ID: 25035498
[TBL] [Abstract][Full Text] [Related]
10. BioNano genome mapping of individual chromosomes supports physical mapping and sequence assembly in complex plant genomes.
Staňková H; Hastie AR; Chan S; Vrána J; Tulpová Z; Kubaláková M; Visendi P; Hayashi S; Luo M; Batley J; Edwards D; Doležel J; Šimková H
Plant Biotechnol J; 2016 Jul; 14(7):1523-31. PubMed ID: 26801360
[TBL] [Abstract][Full Text] [Related]
11. Integration of mate pair sequences to improve shotgun assemblies of flow-sorted chromosome arms of hexaploid wheat.
Belova T; Zhan B; Wright J; Caccamo M; Asp T; Simková H; Kent M; Bendixen C; Panitz F; Lien S; Doležel J; Olsen OA; Sandve SR
BMC Genomics; 2013 Apr; 14():222. PubMed ID: 23557231
[TBL] [Abstract][Full Text] [Related]
12. LR_Gapcloser: a tiling path-based gap closer that uses long reads to complete genome assembly.
Xu GC; Xu TJ; Zhu R; Zhang Y; Li SQ; Wang HW; Li JT
Gigascience; 2019 Jan; 8(1):. PubMed ID: 30576505
[TBL] [Abstract][Full Text] [Related]
13. Separating homeologs by phasing in the tetraploid wheat transcriptome.
Krasileva KV; Buffalo V; Bailey P; Pearce S; Ayling S; Tabbita F; Soria M; Wang S; ; Akhunov E; Uauy C; Dubcovsky J
Genome Biol; 2013 Jun; 14(6):R66. PubMed ID: 23800085
[TBL] [Abstract][Full Text] [Related]
14. Improved hybrid de novo genome assembly of domesticated apple (Malus x domestica).
Li X; Kui L; Zhang J; Xie Y; Wang L; Yan Y; Wang N; Xu J; Li C; Wang W; van Nocker S; Dong Y; Ma F; Guan Q
Gigascience; 2016 Aug; 5(1):35. PubMed ID: 27503335
[TBL] [Abstract][Full Text] [Related]
15. Next-generation sequencing of flow-sorted wheat chromosome 5D reveals lineage-specific translocations and widespread gene duplications.
Lucas SJ; Akpınar BA; Šimková H; Kubaláková M; Doležel J; Budak H
BMC Genomics; 2014 Dec; 15(1):1080. PubMed ID: 25487001
[TBL] [Abstract][Full Text] [Related]
16. Rapid genome evolution revealed by comparative sequence analysis of orthologous regions from four triticeae genomes.
Gu YQ; Coleman-Derr D; Kong X; Anderson OD
Plant Physiol; 2004 May; 135(1):459-70. PubMed ID: 15122014
[TBL] [Abstract][Full Text] [Related]
17. Multiple wheat genomes reveal global variation in modern breeding.
Walkowiak S; Gao L; Monat C; Haberer G; Kassa MT; Brinton J; Ramirez-Gonzalez RH; Kolodziej MC; Delorean E; Thambugala D; Klymiuk V; Byrns B; Gundlach H; Bandi V; Siri JN; Nilsen K; Aquino C; Himmelbach A; Copetti D; Ban T; Venturini L; Bevan M; Clavijo B; Koo DH; Ens J; Wiebe K; N'Diaye A; Fritz AK; Gutwin C; Fiebig A; Fosker C; Fu BX; Accinelli GG; Gardner KA; Fradgley N; Gutierrez-Gonzalez J; Halstead-Nussloch G; Hatakeyama M; Koh CS; Deek J; Costamagna AC; Fobert P; Heavens D; Kanamori H; Kawaura K; Kobayashi F; Krasileva K; Kuo T; McKenzie N; Murata K; Nabeka Y; Paape T; Padmarasu S; Percival-Alwyn L; Kagale S; Scholz U; Sese J; Juliana P; Singh R; Shimizu-Inatsugi R; Swarbreck D; Cockram J; Budak H; Tameshige T; Tanaka T; Tsuji H; Wright J; Wu J; Steuernagel B; Small I; Cloutier S; Keeble-Gagnère G; Muehlbauer G; Tibbets J; Nasuda S; Melonek J; Hucl PJ; Sharpe AG; Clark M; Legg E; Bharti A; Langridge P; Hall A; Uauy C; Mascher M; Krattinger SG; Handa H; Shimizu KK; Distelfeld A; Chalmers K; Keller B; Mayer KFX; Poland J; Stein N; McCartney CA; Spannagl M; Wicker T; Pozniak CJ
Nature; 2020 Dec; 588(7837):277-283. PubMed ID: 33239791
[TBL] [Abstract][Full Text] [Related]
18. Exploring the tertiary gene pool of bread wheat: sequence assembly and analysis of chromosome 5M(g) of Aegilops geniculata.
Tiwari VK; Wang S; Danilova T; Koo DH; Vrána J; Kubaláková M; Hribova E; Rawat N; Kalia B; Singh N; Friebe B; Doležel J; Akhunov E; Poland J; Sabir JS; Gill BS
Plant J; 2015 Nov; 84(4):733-46. PubMed ID: 26408103
[TBL] [Abstract][Full Text] [Related]
19. Hybrid assembly of the large and highly repetitive genome of
Zimin AV; Puiu D; Luo MC; Zhu T; Koren S; Marçais G; Yorke JA; Dvořák J; Salzberg SL
Genome Res; 2017 May; 27(5):787-792. PubMed ID: 28130360
[TBL] [Abstract][Full Text] [Related]
20. The genome of flax (Linum usitatissimum) assembled de novo from short shotgun sequence reads.
Wang Z; Hobson N; Galindo L; Zhu S; Shi D; McDill J; Yang L; Hawkins S; Neutelings G; Datla R; Lambert G; Galbraith DW; Grassa CJ; Geraldes A; Cronk QC; Cullis C; Dash PK; Kumar PA; Cloutier S; Sharpe AG; Wong GK; Wang J; Deyholos MK
Plant J; 2012 Nov; 72(3):461-73. PubMed ID: 22757964
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
