BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

1669 related articles for article (PubMed ID: 28433722)

  • 1. High precision genome sequencing of engineered Gluconobacter oxydans 621H by combining long nanopore and short accurate Illumina reads.
    Kranz A; Vogel A; Degner U; Kiefler I; Bott M; Usadel B; Polen T
    J Biotechnol; 2017 Sep; 258():197-205. PubMed ID: 28433722
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Genome assembly using Nanopore-guided long and error-free DNA reads.
    Madoui MA; Engelen S; Cruaud C; Belser C; Bertrand L; Alberti A; Lemainque A; Wincker P; Aury JM
    BMC Genomics; 2015 Apr; 16(1):327. PubMed ID: 25927464
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Evaluation of strategies for the assembly of diverse bacterial genomes using MinION long-read sequencing.
    Goldstein S; Beka L; Graf J; Klassen JL
    BMC Genomics; 2019 Jan; 20(1):23. PubMed ID: 30626323
    [TBL] [Abstract][Full Text] [Related]  

  • 4. MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach.
    Brown BL; Watson M; Minot SS; Rivera MC; Franklin RB
    Gigascience; 2017 Mar; 6(3):1-10. PubMed ID: 28327976
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.
    Wick RR; Judd LM; Gorrie CL; Holt KE
    PLoS Comput Biol; 2017 Jun; 13(6):e1005595. PubMed ID: 28594827
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Polishing the Oxford Nanopore long-read assemblies of bacterial pathogens with Illumina short reads to improve genomic analyses.
    Chen Z; Erickson DL; Meng J
    Genomics; 2021 May; 113(3):1366-1377. PubMed ID: 33716184
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Comparison of R9.4.1/Kit10 and R10/Kit12 Oxford Nanopore flowcells and chemistries in bacterial genome reconstruction.
    Sanderson ND; Kapel N; Rodger G; Webster H; Lipworth S; Street TL; Peto T; Crook D; Stoesser N
    Microb Genom; 2023 Jan; 9(1):. PubMed ID: 36748454
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The use of Oxford Nanopore native barcoding for complete genome assembly.
    Bayliss SC; Hunt VL; Yokoyama M; Thorpe HA; Feil EJ
    Gigascience; 2017 Mar; 6(3):1-6. PubMed ID: 28327913
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Genome-scale reconstruction of a metabolic network for Gluconobacter oxydans 621H.
    Wu X; Wang X; Lu W
    Biosystems; 2014 Mar; 117():10-4. PubMed ID: 24418346
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Benchmarking of de novo assembly algorithms for Nanopore data reveals optimal performance of OLC approaches.
    Cherukuri Y; Janga SC
    BMC Genomics; 2016 Aug; 17 Suppl 7(Suppl 7):507. PubMed ID: 27556636
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Characterization of MinION nanopore data for resequencing analyses.
    Magi A; Giusti B; Tattini L
    Brief Bioinform; 2017 Nov; 18(6):940-953. PubMed ID: 27559152
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Are we there yet? Benchmarking low-coverage nanopore long-read sequencing for the assembling of mitochondrial genomes using the vulnerable silky shark Carcharhinus falciformis.
    Baeza JA; García-De León FJ
    BMC Genomics; 2022 Apr; 23(1):320. PubMed ID: 35459089
    [TBL] [Abstract][Full Text] [Related]  

  • 13. RNAseq analysis of α-proteobacterium Gluconobacter oxydans 621H.
    Kranz A; Busche T; Vogel A; Usadel B; Kalinowski J; Bott M; Polen T
    BMC Genomics; 2018 Jan; 19(1):24. PubMed ID: 29304737
    [TBL] [Abstract][Full Text] [Related]  

  • 14. de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer.
    Istace B; Friedrich A; d'Agata L; Faye S; Payen E; Beluche O; Caradec C; Davidas S; Cruaud C; Liti G; Lemainque A; Engelen S; Wincker P; Schacherer J; Aury JM
    Gigascience; 2017 Feb; 6(2):1-13. PubMed ID: 28369459
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Dancing the Nanopore limbo - Nanopore metagenomics from small DNA quantities for bacterial genome reconstruction.
    Simon SA; Schmidt K; Griesdorn L; Soares AR; Bornemann TLV; Probst AJ
    BMC Genomics; 2023 Dec; 24(1):727. PubMed ID: 38041056
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Oxford Nanopore sequencing, hybrid error correction, and de novo assembly of a eukaryotic genome.
    Goodwin S; Gurtowski J; Ethe-Sayers S; Deshpande P; Schatz MC; McCombie WR
    Genome Res; 2015 Nov; 25(11):1750-6. PubMed ID: 26447147
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Lost in plasmids: next generation sequencing and the complex genome of the tick-borne pathogen Borrelia burgdorferi.
    Margos G; Hepner S; Mang C; Marosevic D; Reynolds SE; Krebs S; Sing A; Derdakova M; Reiter MA; Fingerle V
    BMC Genomics; 2017 May; 18(1):422. PubMed ID: 28558786
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Assembly of chloroplast genomes with long- and short-read data: a comparison of approaches using Eucalyptus pauciflora as a test case.
    Wang W; Schalamun M; Morales-Suarez A; Kainer D; Schwessinger B; Lanfear R
    BMC Genomics; 2018 Dec; 19(1):977. PubMed ID: 30594129
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Metabolic engineering of Gluconobacter oxydans 621H for increased biomass yield.
    Kiefler I; Bringer S; Bott M
    Appl Microbiol Biotechnol; 2017 Jul; 101(13):5453-5467. PubMed ID: 28484812
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Comparison of Illumina and Oxford Nanopore Technology for genome analysis of Francisella tularensis, Bacillus anthracis, and Brucella suis.
    Linde J; Brangsch H; Hölzer M; Thomas C; Elschner MC; Melzer F; Tomaso H
    BMC Genomics; 2023 May; 24(1):258. PubMed ID: 37173617
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 84.