These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

160 related articles for article (PubMed ID: 28453724)

  • 1. A Generative Angular Model of Protein Structure Evolution.
    Golden M; García-Portugués E; Sørensen M; Mardia KV; Hamelryck T; Hein J
    Mol Biol Evol; 2017 Aug; 34(8):2085-2100. PubMed ID: 28453724
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Assessment of the probabilities for evolutionary structural changes in protein folds.
    Viksna J; Gilbert D
    Bioinformatics; 2007 Apr; 23(7):832-41. PubMed ID: 17282999
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The Impact of Native State Switching on Protein Sequence Evolution.
    Sharir-Ivry A; Xia Y
    Mol Biol Evol; 2017 Jun; 34(6):1378-1390. PubMed ID: 28333346
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Can molecular dynamics simulations help in discriminating correct from erroneous protein 3D models?
    Taly JF; Marin A; Gibrat JF
    BMC Bioinformatics; 2008 Jan; 9():6. PubMed ID: 18179702
    [TBL] [Abstract][Full Text] [Related]  

  • 5. TALI: local alignment of protein structures using backbone torsion angles.
    Miao X; Waddell PJ; Valafar H
    J Bioinform Comput Biol; 2008 Feb; 6(1):163-81. PubMed ID: 18324751
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Imprint of evolutionary conservation and protein structure variation on the binding function of protein tyrosine kinases.
    Verkhivker GM
    Bioinformatics; 2006 Aug; 22(15):1846-54. PubMed ID: 16720585
    [TBL] [Abstract][Full Text] [Related]  

  • 7. VISTAL--a new 2D visualization tool of protein 3D structural alignments.
    Kolodny R; Honig B
    Bioinformatics; 2006 Sep; 22(17):2166-7. PubMed ID: 16837525
    [TBL] [Abstract][Full Text] [Related]  

  • 8. MAGOS: multiple alignment and modelling server.
    Garnier N; Friedrich A; Bolze R; Bettler E; Moulinier L; Geourjon C; Thompson JD; Deléage G; Poch O
    Bioinformatics; 2006 Sep; 22(17):2164-5. PubMed ID: 16820425
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A multi-objective evolutionary approach to the protein structure prediction problem.
    Cutello V; Narzisi G; Nicosia G
    J R Soc Interface; 2006 Feb; 3(6):139-51. PubMed ID: 16849226
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Multiple Alignment of protein structures and sequences for VMD.
    Eargle J; Wright D; Luthey-Schulten Z
    Bioinformatics; 2006 Feb; 22(4):504-6. PubMed ID: 16339280
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Prediction of the phenotypic effects of non-synonymous single nucleotide polymorphisms using structural and evolutionary information.
    Bao L; Cui Y
    Bioinformatics; 2005 May; 21(10):2185-90. PubMed ID: 15746281
    [TBL] [Abstract][Full Text] [Related]  

  • 12. An alternative model of amino acid replacement.
    Crooks GE; Brenner SE
    Bioinformatics; 2005 Apr; 21(7):975-80. PubMed ID: 15531614
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Integrating protein structures and precomputed genealogies in the Magnum database: examples with cellular retinoid binding proteins.
    Bradley ME; Benner SA
    BMC Bioinformatics; 2006 Feb; 7():89. PubMed ID: 16504077
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Protein structure alignment considering phenotypic plasticity.
    Csaba G; Birzele F; Zimmer R
    Bioinformatics; 2008 Aug; 24(16):i98-104. PubMed ID: 18689847
    [TBL] [Abstract][Full Text] [Related]  

  • 15. PFRES: protein fold classification by using evolutionary information and predicted secondary structure.
    Chen K; Kurgan L
    Bioinformatics; 2007 Nov; 23(21):2843-50. PubMed ID: 17942446
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A stochastic evolutionary model for protein structure alignment and phylogeny.
    Challis CJ; Schmidler SC
    Mol Biol Evol; 2012 Nov; 29(11):3575-87. PubMed ID: 22723302
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Structural divergence and distant relationships in proteins: evolution of the globins.
    Lecomte JT; Vuletich DA; Lesk AM
    Curr Opin Struct Biol; 2005 Jun; 15(3):290-301. PubMed ID: 15922591
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Improved pairwise alignments of proteins in the Twilight Zone using local structure predictions.
    Huang YM; Bystroff C
    Bioinformatics; 2006 Feb; 22(4):413-22. PubMed ID: 16352653
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Family specific rates of protein evolution.
    Luz H; Vingron M
    Bioinformatics; 2006 May; 22(10):1166-71. PubMed ID: 16510497
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Exploiting evolutionary relationships for predicting protein structures.
    Tramontano A; Morea V
    Biotechnol Bioeng; 2003 Dec; 84(7):756-62. PubMed ID: 14708116
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.