BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

277 related articles for article (PubMed ID: 28482663)

  • 21. Conformational states of Zika virus non-structural protein 3 determined by molecular dynamics simulations with small-angle X-Ray scattering data.
    Zhu G; Pan A; Grüber G; Lu L
    Prog Biophys Mol Biol; 2019 May; 143():13-19. PubMed ID: 30291845
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Interpreting SAXS/WAXS Data with Explicit-Solvent Simulations: A Practical Guide.
    Hermann MR; Hub JS
    Methods Mol Biol; 2020; 2168():199-215. PubMed ID: 33582993
    [TBL] [Abstract][Full Text] [Related]  

  • 23. What Can We Learn from Wide-Angle Solution Scattering?
    Wang Y; Zhou H; Onuk E; Badger J; Makowski L
    Adv Exp Med Biol; 2017; 1009():131-147. PubMed ID: 29218557
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Interpreting solution X-ray scattering data using molecular simulations.
    Hub JS
    Curr Opin Struct Biol; 2018 Apr; 49():18-26. PubMed ID: 29172147
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Effects of ionic strength on SAXS data for proteins revealed by molecular dynamics simulations.
    Oroguchi T; Ikeguchi M
    J Chem Phys; 2011 Jan; 134(2):025102. PubMed ID: 21241150
    [TBL] [Abstract][Full Text] [Related]  

  • 26. X-ray solution scattering studies of the structural diversity intrinsic to protein ensembles.
    Makowski L; Gore D; Mandava S; Minh D; Park S; Rodi DJ; Fischetti RF
    Biopolymers; 2011 Aug; 95(8):531-42. PubMed ID: 21462170
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Characterization of the NISTmAb Reference Material using small-angle scattering and molecular simulation : Part I: Dilute protein solutions.
    Castellanos MM; Howell SC; Gallagher DT; Curtis JE
    Anal Bioanal Chem; 2018 Mar; 410(8):2141-2159. PubMed ID: 29423600
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Rapid interpretation of small-angle X-ray scattering data.
    Weiel M; Reinartz I; Schug A
    PLoS Comput Biol; 2019 Mar; 15(3):e1006900. PubMed ID: 30901335
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Validation of macromolecular flexibility in solution by small-angle X-ray scattering (SAXS).
    Hammel M
    Eur Biophys J; 2012 Oct; 41(10):789-99. PubMed ID: 22639100
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Application of SAXS for the Structural Characterization of IDPs.
    Kachala M; Valentini E; Svergun DI
    Adv Exp Med Biol; 2015; 870():261-89. PubMed ID: 26387105
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Structural Properties of Protein-Detergent Complexes from SAXS and MD Simulations.
    Chen PC; Hub JS
    J Phys Chem Lett; 2015 Dec; 6(24):5116-21. PubMed ID: 26637017
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Accurate and Efficient SAXS/SANS Implementation Including Solvation Layer Effects Suitable for Molecular Simulations.
    Ballabio F; Paissoni C; Bollati M; de Rosa M; Capelli R; Camilloni C
    J Chem Theory Comput; 2023 Nov; 19(22):8401-8413. PubMed ID: 37923304
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Reweighting of molecular simulations with explicit-solvent SAXS restraints elucidates ion-dependent RNA ensembles.
    Bernetti M; Hall KB; Bussi G
    Nucleic Acids Res; 2021 Aug; 49(14):e84. PubMed ID: 34107023
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Sampling Enrichment toward Target Structures Using Hybrid Molecular Dynamics-Monte Carlo Simulations.
    Yang K; Różycki B; Cui F; Shi C; Chen W; Li Y
    PLoS One; 2016; 11(5):e0156043. PubMed ID: 27227775
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Comparison of native and non-native ubiquitin oligomers reveals analogous structures and reactivities.
    Pham GH; Rana AS; Korkmaz EN; Trang VH; Cui Q; Strieter ER
    Protein Sci; 2016 Feb; 25(2):456-71. PubMed ID: 26506216
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Structural analysis of intrinsically disordered proteins by small-angle X-ray scattering.
    Bernadó P; Svergun DI
    Mol Biosyst; 2012 Jan; 8(1):151-67. PubMed ID: 21947276
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Structural interpretations of a flexible cold-active AMS8 lipase by combining small-angle X-ray scattering and molecular dynamics simulation (SAXS-MD).
    Yaacob N; Kamonsutthipaijit N; Soontaranon S; Leow TC; Rahman RNZRA; Ali MSM
    Int J Biol Macromol; 2022 Nov; 220():1095-1103. PubMed ID: 36029961
    [TBL] [Abstract][Full Text] [Related]  

  • 38. SAXS-guided Enhanced Unbiased Sampling for Structure Determination of Proteins and Complexes.
    Zhao C; Shukla D
    Sci Rep; 2018 Dec; 8(1):17748. PubMed ID: 30531946
    [TBL] [Abstract][Full Text] [Related]  

  • 39. A practical guide to small angle X-ray scattering (SAXS) of flexible and intrinsically disordered proteins.
    Kikhney AG; Svergun DI
    FEBS Lett; 2015 Sep; 589(19 Pt A):2570-7. PubMed ID: 26320411
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Coarse-Grained Molecular Modeling of the Solution Structure Ensemble of Dengue Virus Nonstructural Protein 5 with Small-Angle X-ray Scattering Intensity.
    Zhu G; Saw WG; Nalaparaju A; Grüber G; Lu L
    J Phys Chem B; 2017 Mar; 121(10):2252-2264. PubMed ID: 28224788
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 14.