These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
6. Flux Balance Analysis with Objective Function Defined by Proteomics Data-Metabolism of Mycobacterium tuberculosis Exposed to Mefloquine. Montezano D; Meek L; Gupta R; Bermudez LE; Bermudez JC PLoS One; 2015; 10(7):e0134014. PubMed ID: 26218987 [TBL] [Abstract][Full Text] [Related]
7. Systematic Evaluation of the Viable Microbiome in the Human Oral and Gut Samples with Spike-in Gram+/- Bacteria. Liu F; Lu H; Dong B; Huang X; Cheng H; Qu R; Hu Y; Zhong L; Guo Z; You Y; Xu ZZ mSystems; 2023 Apr; 8(2):e0073822. PubMed ID: 36971593 [TBL] [Abstract][Full Text] [Related]
8. Revealing the bacterial butyrate synthesis pathways by analyzing (meta)genomic data. Vital M; Howe AC; Tiedje JM mBio; 2014 Apr; 5(2):e00889. PubMed ID: 24757212 [TBL] [Abstract][Full Text] [Related]
9. Genome-scale community modeling for deciphering the inter-microbial metabolic interactions in fungus-farming termite gut microbiome. Kundu P; Ghosh A Comput Biol Med; 2023 Mar; 154():106600. PubMed ID: 36739820 [TBL] [Abstract][Full Text] [Related]
10. Microbial Community Metabolic Modeling: A Community Data-Driven Network Reconstruction. Henry CS; Bernstein HC; Weisenhorn P; Taylor RC; Lee JY; Zucker J; Song HS J Cell Physiol; 2016 Nov; 231(11):2339-45. PubMed ID: 27186840 [TBL] [Abstract][Full Text] [Related]
11. Constraint-based stoichiometric modelling from single organisms to microbial communities. Gottstein W; Olivier BG; Bruggeman FJ; Teusink B J R Soc Interface; 2016 Nov; 13(124):. PubMed ID: 28334697 [TBL] [Abstract][Full Text] [Related]
12. Resource allocation in metabolic networks: kinetic optimization and approximations by FBA. Müller S; Regensburger G; Steuer R Biochem Soc Trans; 2015 Dec; 43(6):1195-200. PubMed ID: 26614660 [TBL] [Abstract][Full Text] [Related]
13. Microbial diversity in the era of omic technologies. Nikolaki S; Tsiamis G Biomed Res Int; 2013; 2013():958719. PubMed ID: 24260747 [TBL] [Abstract][Full Text] [Related]
15. Genome-scale modelling of microbial metabolism with temporal and spatial resolution. Henson MA Biochem Soc Trans; 2015 Dec; 43(6):1164-71. PubMed ID: 26614655 [TBL] [Abstract][Full Text] [Related]
16. Advances in Genome-Scale Metabolic Modeling toward Microbial Community Analysis of the Human Microbiome. Esvap E; Ulgen KO ACS Synth Biol; 2021 Sep; 10(9):2121-2137. PubMed ID: 34402617 [TBL] [Abstract][Full Text] [Related]
17. A depth-first search algorithm to compute elementary flux modes by linear programming. Quek LE; Nielsen LK BMC Syst Biol; 2014 Jul; 8():94. PubMed ID: 25074068 [TBL] [Abstract][Full Text] [Related]
18. Comparative analyses of the gut microbiota among three different wild geese species in the genus Anser. Wang W; Liu Y; Yang Y; Wang A; Sharshov K; Li Y; Cao M; Mao P; Li L J Basic Microbiol; 2018 Jun; 58(6):543-553. PubMed ID: 29668076 [TBL] [Abstract][Full Text] [Related]
19. Even allocation of benefits stabilizes microbial community engaged in metabolic division of labor. Wang M; Chen X; Liu X; Fang Y; Zheng X; Huang T; Tang YQ; Ackermann M; Nie Y; Wu XL Cell Rep; 2022 Sep; 40(13):111410. PubMed ID: 36170826 [TBL] [Abstract][Full Text] [Related]