BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

587 related articles for article (PubMed ID: 28542514)

  • 1. PanWeb: A web interface for pan-genomic analysis.
    Pantoja Y; Pinheiro K; Veras A; Araújo F; Lopes de Sousa A; Guimarães LC; Silva A; Ramos RTJ
    PLoS One; 2017; 12(5):e0178154. PubMed ID: 28542514
    [TBL] [Abstract][Full Text] [Related]  

  • 2. PGAP-X: extension on pan-genome analysis pipeline.
    Zhao Y; Sun C; Zhao D; Zhang Y; You Y; Jia X; Yang J; Wang L; Wang J; Fu H; Kang Y; Chen F; Yu J; Wu J; Xiao J
    BMC Genomics; 2018 Jan; 19(Suppl 1):36. PubMed ID: 29363431
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The MicrobesOnline Web site for comparative genomics.
    Alm EJ; Huang KH; Price MN; Koche RP; Keller K; Dubchak IL; Arkin AP
    Genome Res; 2005 Jul; 15(7):1015-22. PubMed ID: 15998914
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A De-Novo Genome Analysis Pipeline (DeNoGAP) for large-scale comparative prokaryotic genomics studies.
    Thakur S; Guttman DS
    BMC Bioinformatics; 2016 Jun; 17(1):260. PubMed ID: 27363390
    [TBL] [Abstract][Full Text] [Related]  

  • 5. The missing graphical user interface for genomics.
    Schatz MC
    Genome Biol; 2010; 11(8):128. PubMed ID: 20804568
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions.
    Laing C; Buchanan C; Taboada EN; Zhang Y; Kropinski A; Villegas A; Thomas JE; Gannon VP
    BMC Bioinformatics; 2010 Sep; 11():461. PubMed ID: 20843356
    [TBL] [Abstract][Full Text] [Related]  

  • 7. BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons.
    Alikhan NF; Petty NK; Ben Zakour NL; Beatson SA
    BMC Genomics; 2011 Aug; 12():402. PubMed ID: 21824423
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Pan4Draft: A Computational Tool to Improve the Accuracy of Pan-Genomic Analysis Using Draft Genomes.
    Veras A; Araujo F; Pinheiro K; Guimarães L; Azevedo V; Soares S; da Costa da Silva A; Ramos R
    Sci Rep; 2018 Jun; 8(1):9670. PubMed ID: 29942087
    [TBL] [Abstract][Full Text] [Related]  

  • 9. ITEP: an integrated toolkit for exploration of microbial pan-genomes.
    Benedict MN; Henriksen JR; Metcalf WW; Whitaker RJ; Price ND
    BMC Genomics; 2014 Jan; 15():8. PubMed ID: 24387194
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Visualization of comparative genomic analyses by BLAST score ratio.
    Rasko DA; Myers GS; Ravel J
    BMC Bioinformatics; 2005 Jan; 6():2. PubMed ID: 15634352
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The bioinformatics resource for oral pathogens.
    Chen T; Abbey K; Deng WJ; Cheng MC
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W734-40. PubMed ID: 15980574
    [TBL] [Abstract][Full Text] [Related]  

  • 12. CANEapp: a user-friendly application for automated next generation transcriptomic data analysis.
    Velmeshev D; Lally P; Magistri M; Faghihi MA
    BMC Genomics; 2016 Jan; 17():49. PubMed ID: 26758513
    [TBL] [Abstract][Full Text] [Related]  

  • 13. GeneViTo: visualizing gene-product functional and structural features in genomic datasets.
    Vernikos GS; Gkogkas CG; Promponas VJ; Hamodrakas SJ
    BMC Bioinformatics; 2003 Oct; 4():53. PubMed ID: 14594459
    [TBL] [Abstract][Full Text] [Related]  

  • 14. PanTools: representation, storage and exploration of pan-genomic data.
    Sheikhizadeh S; Schranz ME; Akdel M; de Ridder D; Smit S
    Bioinformatics; 2016 Sep; 32(17):i487-i493. PubMed ID: 27587666
    [TBL] [Abstract][Full Text] [Related]  

  • 15. WormBase: methods for data mining and comparative genomics.
    Harris TW; Stein LD
    Methods Mol Biol; 2006; 351():31-50. PubMed ID: 16988424
    [TBL] [Abstract][Full Text] [Related]  

  • 16. PGAP: pan-genomes analysis pipeline.
    Zhao Y; Wu J; Yang J; Sun S; Xiao J; Yu J
    Bioinformatics; 2012 Feb; 28(3):416-8. PubMed ID: 22130594
    [TBL] [Abstract][Full Text] [Related]  

  • 17. MILANO--custom annotation of microarray results using automatic literature searches.
    Rubinstein R; Simon I
    BMC Bioinformatics; 2005 Jan; 6():12. PubMed ID: 15661078
    [TBL] [Abstract][Full Text] [Related]  

  • 18. GenColors: accelerated comparative analysis and annotation of prokaryotic genomes at various stages of completeness.
    Romualdi A; Siddiqui R; Glöckner G; Lehmann R; Sühnel J
    Bioinformatics; 2005 Sep; 21(18):3669-71. PubMed ID: 16076887
    [TBL] [Abstract][Full Text] [Related]  

  • 19. PLATCOM: a Platform for Computational Comparative Genomics.
    Choi K; Ma Y; Choi JH; Kim S
    Bioinformatics; 2005 May; 21(10):2514-6. PubMed ID: 15731206
    [TBL] [Abstract][Full Text] [Related]  

  • 20. SIMBA: a web tool for managing bacterial genome assembly generated by Ion PGM sequencing technology.
    Mariano DC; Pereira FL; Aguiar EL; Oliveira LC; Benevides L; Guimarães LC; Folador EL; Sousa TJ; Ghosh P; Barh D; Figueiredo HC; Silva A; Ramos RT; Azevedo VA
    BMC Bioinformatics; 2016 Dec; 17(Suppl 18):456. PubMed ID: 28105921
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 30.