307 related articles for article (PubMed ID: 28558053)
1. Novel mRNA-specific effects of ribosome drop-off on translation rate and polysome profile.
Bonnin P; Kern N; Young NT; Stansfield I; Romano MC
PLoS Comput Biol; 2017 May; 13(5):e1005555. PubMed ID: 28558053
[TBL] [Abstract][Full Text] [Related]
2. Genome-wide analysis of mRNA translation profiles in Saccharomyces cerevisiae.
Arava Y; Wang Y; Storey JD; Liu CL; Brown PO; Herschlag D
Proc Natl Acad Sci U S A; 2003 Apr; 100(7):3889-94. PubMed ID: 12660367
[TBL] [Abstract][Full Text] [Related]
3. Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling.
Ingolia NT; Ghaemmaghami S; Newman JR; Weissman JS
Science; 2009 Apr; 324(5924):218-23. PubMed ID: 19213877
[TBL] [Abstract][Full Text] [Related]
4. Detecting translational regulation by change point analysis of ribosome profiling data sets.
Zupanic A; Meplan C; Grellscheid SN; Mathers JC; Kirkwood TB; Hesketh JE; Shanley DP
RNA; 2014 Oct; 20(10):1507-18. PubMed ID: 25147239
[TBL] [Abstract][Full Text] [Related]
5. Ribosome traffic on mRNAs maps to gene ontology: genome-wide quantification of translation initiation rates and polysome size regulation.
Ciandrini L; Stansfield I; Romano MC
PLoS Comput Biol; 2013; 9(1):e1002866. PubMed ID: 23382661
[TBL] [Abstract][Full Text] [Related]
6. Increased ribosome density associated to positively charged residues is evident in ribosome profiling experiments performed in the absence of translation inhibitors.
Requião RD; de Souza HJ; Rossetto S; Domitrovic T; Palhano FL
RNA Biol; 2016 Jun; 13(6):561-8. PubMed ID: 27064519
[TBL] [Abstract][Full Text] [Related]
7. Full-length ribosome density prediction by a multi-input and multi-output model.
Tian T; Li S; Lang P; Zhao D; Zeng J
PLoS Comput Biol; 2021 Mar; 17(3):e1008842. PubMed ID: 33770074
[TBL] [Abstract][Full Text] [Related]
8. Translation of nonSTOP mRNA is repressed post-initiation in mammalian cells.
Akimitsu N; Tanaka J; Pelletier J
EMBO J; 2007 May; 26(9):2327-38. PubMed ID: 17446866
[TBL] [Abstract][Full Text] [Related]
9. Polysome analysis for determining mRNA and ribosome association in Saccharomyces cerevisiae.
Hu W; Coller J
Methods Enzymol; 2013; 530():193-206. PubMed ID: 24034323
[TBL] [Abstract][Full Text] [Related]
10. Inferring efficiency of translation initiation and elongation from ribosome profiling.
Szavits-Nossan J; Ciandrini L
Nucleic Acids Res; 2020 Sep; 48(17):9478-9490. PubMed ID: 32821926
[TBL] [Abstract][Full Text] [Related]
11. Translation complex profile sequencing to study the in vivo dynamics of mRNA-ribosome interactions during translation initiation, elongation and termination.
Shirokikh NE; Archer SK; Beilharz TH; Powell D; Preiss T
Nat Protoc; 2017 Apr; 12(4):697-731. PubMed ID: 28253237
[TBL] [Abstract][Full Text] [Related]
12. Dissecting eukaryotic translation and its control by ribosome density mapping.
Arava Y; Boas FE; Brown PO; Herschlag D
Nucleic Acids Res; 2005; 33(8):2421-32. PubMed ID: 15860778
[TBL] [Abstract][Full Text] [Related]
13. Trade-offs between tRNA abundance and mRNA secondary structure support smoothing of translation elongation rate.
Gorochowski TE; Ignatova Z; Bovenberg RA; Roubos JA
Nucleic Acids Res; 2015 Mar; 43(6):3022-32. PubMed ID: 25765653
[TBL] [Abstract][Full Text] [Related]
14. De novo translation initiation on membrane-bound ribosomes as a mechanism for localization of cytosolic protein mRNAs to the endoplasmic reticulum.
Jagannathan S; Reid DW; Cox AH; Nicchitta CV
RNA; 2014 Oct; 20(10):1489-98. PubMed ID: 25142066
[TBL] [Abstract][Full Text] [Related]
15. Bacterial translational regulations: high diversity between all mRNAs and major role in gene expression.
Picard F; Milhem H; Loubière P; Laurent B; Cocaign-Bousquet M; Girbal L
BMC Genomics; 2012 Oct; 13():528. PubMed ID: 23036066
[TBL] [Abstract][Full Text] [Related]
16. Accurate design of translational output by a neural network model of ribosome distribution.
Tunney R; McGlincy NJ; Graham ME; Naddaf N; Pachter L; Lareau LF
Nat Struct Mol Biol; 2018 Jul; 25(7):577-582. PubMed ID: 29967537
[TBL] [Abstract][Full Text] [Related]
17. Co-translational mRNA decay in Saccharomyces cerevisiae.
Hu W; Sweet TJ; Chamnongpol S; Baker KE; Coller J
Nature; 2009 Sep; 461(7261):225-9. PubMed ID: 19701183
[TBL] [Abstract][Full Text] [Related]
18. An mRNA-derived noncoding RNA targets and regulates the ribosome.
Pircher A; Bakowska-Zywicka K; Schneider L; Zywicki M; Polacek N
Mol Cell; 2014 Apr; 54(1):147-155. PubMed ID: 24685157
[TBL] [Abstract][Full Text] [Related]
19. Translation elongation and mRNA stability are coupled through the ribosomal A-site.
Hanson G; Alhusaini N; Morris N; Sweet T; Coller J
RNA; 2018 Oct; 24(10):1377-1389. PubMed ID: 29997263
[TBL] [Abstract][Full Text] [Related]
20. Dom34:Hbs1 promotes subunit dissociation and peptidyl-tRNA drop-off to initiate no-go decay.
Shoemaker CJ; Eyler DE; Green R
Science; 2010 Oct; 330(6002):369-72. PubMed ID: 20947765
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
