145 related articles for article (PubMed ID: 28559010)
1. OpenMS - A platform for reproducible analysis of mass spectrometry data.
Pfeuffer J; Sachsenberg T; Alka O; Walzer M; Fillbrunn A; Nilse L; Schilling O; Reinert K; Kohlbacher O
J Biotechnol; 2017 Nov; 261():142-148. PubMed ID: 28559010
[TBL] [Abstract][Full Text] [Related]
2. OpenMS: a flexible open-source software platform for mass spectrometry data analysis.
Röst HL; Sachsenberg T; Aiche S; Bielow C; Weisser H; Aicheler F; Andreotti S; Ehrlich HC; Gutenbrunner P; Kenar E; Liang X; Nahnsen S; Nilse L; Pfeuffer J; Rosenberger G; Rurik M; Schmitt U; Veit J; Walzer M; Wojnar D; Wolski WE; Schilling O; Choudhary JS; Malmström L; Aebersold R; Reinert K; Kohlbacher O
Nat Methods; 2016 Aug; 13(9):741-8. PubMed ID: 27575624
[TBL] [Abstract][Full Text] [Related]
3. OpenMS and TOPP: open source software for LC-MS data analysis.
Bertsch A; Gröpl C; Reinert K; Kohlbacher O
Methods Mol Biol; 2011; 696():353-67. PubMed ID: 21063960
[TBL] [Abstract][Full Text] [Related]
4. Fast and Efficient XML Data Access for Next-Generation Mass Spectrometry.
Röst HL; Schmitt U; Aebersold R; Malmström L
PLoS One; 2015; 10(4):e0125108. PubMed ID: 25927999
[TBL] [Abstract][Full Text] [Related]
5. PaDuA: A Python Library for High-Throughput (Phospho)proteomics Data Analysis.
Ressa A; Fitzpatrick M; van den Toorn H; Heck AJR; Altelaar M
J Proteome Res; 2019 Feb; 18(2):576-584. PubMed ID: 30525654
[TBL] [Abstract][Full Text] [Related]
6. OpenMS and TOPP: open source software for LC-MS data analysis.
Reinert K; Kohlbacher O
Methods Mol Biol; 2010; 604():201-11. PubMed ID: 20013373
[TBL] [Abstract][Full Text] [Related]
7. OpenMS - an open-source software framework for mass spectrometry.
Sturm M; Bertsch A; Gröpl C; Hildebrandt A; Hussong R; Lange E; Pfeifer N; Schulz-Trieglaff O; Zerck A; Reinert K; Kohlbacher O
BMC Bioinformatics; 2008 Mar; 9():163. PubMed ID: 18366760
[TBL] [Abstract][Full Text] [Related]
8. An evolving computational platform for biological mass spectrometry: workflows, statistics and data mining with MASSyPup64.
Winkler R
PeerJ; 2015; 3():e1401. PubMed ID: 26618079
[TBL] [Abstract][Full Text] [Related]
9. pyOpenMS: a Python-based interface to the OpenMS mass-spectrometry algorithm library.
Röst HL; Schmitt U; Aebersold R; Malmström L
Proteomics; 2014 Jan; 14(1):74-7. PubMed ID: 24420968
[TBL] [Abstract][Full Text] [Related]
10. A Galaxy of informatics resources for MS-based proteomics.
Mehta S; Bernt M; Chambers M; Fahrner M; Föll MC; Gruening B; Horro C; Johnson JE; Loux V; Rajczewski AT; Schilling O; Vandenbrouck Y; Gustafsson OJR; Thang WCM; Hyde C; Price G; Jagtap PD; Griffin TJ
Expert Rev Proteomics; 2023; 20(11):251-266. PubMed ID: 37787106
[TBL] [Abstract][Full Text] [Related]
11. Workflows for automated downstream data analysis and visualization in large-scale computational mass spectrometry.
Aiche S; Sachsenberg T; Kenar E; Walzer M; Wiswedel B; Kristl T; Boyles M; Duschl A; Huber CG; Berthold MR; Reinert K; Kohlbacher O
Proteomics; 2015 Apr; 15(8):1443-7. PubMed ID: 25604327
[TBL] [Abstract][Full Text] [Related]
12. Metabolomics Data Processing Using OpenMS.
Rurik M; Alka O; Aicheler F; Kohlbacher O
Methods Mol Biol; 2020; 2104():49-60. PubMed ID: 31953812
[TBL] [Abstract][Full Text] [Related]
13. Accessible and reproducible mass spectrometry imaging data analysis in Galaxy.
Föll MC; Moritz L; Wollmann T; Stillger MN; Vockert N; Werner M; Bronsert P; Rohr K; Grüning BA; Schilling O
Gigascience; 2019 Dec; 8(12):. PubMed ID: 31816088
[TBL] [Abstract][Full Text] [Related]
14. multiplierz v2.0: A Python-based ecosystem for shared access and analysis of native mass spectrometry data.
Alexander WM; Ficarro SB; Adelmant G; Marto JA
Proteomics; 2017 Aug; 17(15-16):. PubMed ID: 28686798
[TBL] [Abstract][Full Text] [Related]
15. TOPPAS: a graphical workflow editor for the analysis of high-throughput proteomics data.
Junker J; Bielow C; Bertsch A; Sturm M; Reinert K; Kohlbacher O
J Proteome Res; 2012 Jul; 11(7):3914-20. PubMed ID: 22583024
[TBL] [Abstract][Full Text] [Related]
16. TOPPView: an open-source viewer for mass spectrometry data.
Sturm M; Kohlbacher O
J Proteome Res; 2009 Jul; 8(7):3760-3. PubMed ID: 19425593
[TBL] [Abstract][Full Text] [Related]
17. In-depth analysis of protein inference algorithms using multiple search engines and well-defined metrics.
Audain E; Uszkoreit J; Sachsenberg T; Pfeuffer J; Liang X; Hermjakob H; Sanchez A; Eisenacher M; Reinert K; Tabb DL; Kohlbacher O; Perez-Riverol Y
J Proteomics; 2017 Jan; 150():170-182. PubMed ID: 27498275
[TBL] [Abstract][Full Text] [Related]
18. "Polymeromics": Mass spectrometry based strategies in polymer science toward complete sequencing approaches: a review.
Altuntaş E; Schubert US
Anal Chim Acta; 2014 Jan; 808():56-69. PubMed ID: 24370093
[TBL] [Abstract][Full Text] [Related]
19. MZA: A Data Conversion Tool to Facilitate Software Development and Artificial Intelligence Research in Multidimensional Mass Spectrometry.
Bilbao A; Ross DH; Lee JY; Donor MT; Williams SM; Zhu Y; Ibrahim YM; Smith RD; Zheng X
J Proteome Res; 2023 Feb; 22(2):508-513. PubMed ID: 36414245
[TBL] [Abstract][Full Text] [Related]
20.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
[Next] [New Search]
