These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

78 related articles for article (PubMed ID: 28587743)

  • 1. A novel alignment-free vector method to cluster protein sequences.
    He L; Li Y; He RL; Yau SS
    J Theor Biol; 2017 Aug; 427():41-52. PubMed ID: 28587743
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A novel fast vector method for genetic sequence comparison.
    Li Y; He L; Lucy He R; Yau SS
    Sci Rep; 2017 Sep; 7(1):12226. PubMed ID: 28939913
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Protein map: an alignment-free sequence comparison method based on various properties of amino acids.
    Yu C; Cheng SY; He RL; Yau SS
    Gene; 2011 Oct; 486(1-2):110-8. PubMed ID: 21803133
    [TBL] [Abstract][Full Text] [Related]  

  • 4. An alignment-free measure based on physicochemical properties of amino acids for protein sequence comparison.
    Zhao Y; Xue X; Xie X
    Comput Biol Chem; 2019 Jun; 80():10-15. PubMed ID: 30851619
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Classification of Protein Sequences by a Novel Alignment-Free Method on Bacterial and Virus Families.
    Guan M; Zhao L; Yau SS
    Genes (Basel); 2022 Sep; 13(10):. PubMed ID: 36292629
    [TBL] [Abstract][Full Text] [Related]  

  • 6. An alignment-free method to find similarity among protein sequences via the general form of Chou's pseudo amino acid composition.
    Gupta MK; Niyogi R; Misra M
    SAR QSAR Environ Res; 2013; 24(7):597-609. PubMed ID: 23710804
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A new distribution vector and its application in genome clustering.
    Zhao B; He RL; Yau SS
    Mol Phylogenet Evol; 2011 May; 59(2):438-43. PubMed ID: 21385621
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Deriving the phylogenetic information from some physicochemical properties of protein sequences computed.
    Chiu SH; Chen CC; Yuan GF; Lin TH
    J Comput Chem; 2011 Jan; 32(1):70-80. PubMed ID: 20602446
    [TBL] [Abstract][Full Text] [Related]  

  • 9. High-quality sequence clustering guided by network topology and multiple alignment likelihood.
    Miele V; Penel S; Daubin V; Picard F; Kahn D; Duret L
    Bioinformatics; 2012 Apr; 28(8):1078-85. PubMed ID: 22368255
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A measure of DNA sequence similarity by Fourier Transform with applications on hierarchical clustering.
    Yin C; Chen Y; Yau SS
    J Theor Biol; 2014 Oct; 359():18-28. PubMed ID: 24911780
    [TBL] [Abstract][Full Text] [Related]  

  • 11. An improved model for whole genome phylogenetic analysis by Fourier transform.
    Yin C; Yau SS
    J Theor Biol; 2015 Oct; 382():99-110. PubMed ID: 26151589
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Fast model-based protein homology detection without alignment.
    Hochreiter S; Heusel M; Obermayer K
    Bioinformatics; 2007 Jul; 23(14):1728-36. PubMed ID: 17488755
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Alignment-free distance measure based on return time distribution for sequence analysis: applications to clustering, molecular phylogeny and subtyping.
    Kolekar P; Kale M; Kulkarni-Kale U
    Mol Phylogenet Evol; 2012 Nov; 65(2):510-22. PubMed ID: 22820020
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Positional Correlation Natural Vector: A Novel Method for Genome Comparison.
    He L; Dong R; He RL; Yau SS
    Int J Mol Sci; 2020 May; 21(11):. PubMed ID: 32485813
    [TBL] [Abstract][Full Text] [Related]  

  • 15. transAlign: using amino acids to facilitate the multiple alignment of protein-coding DNA sequences.
    Bininda-Emonds OR
    BMC Bioinformatics; 2005 Jun; 6():156. PubMed ID: 15969769
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A new method to cluster genomes based on cumulative Fourier power spectrum.
    Dong R; Zhu Z; Yin C; He RL; Yau SS
    Gene; 2018 Oct; 673():239-250. PubMed ID: 29935353
    [TBL] [Abstract][Full Text] [Related]  

  • 17. On the quality of tree-based protein classification.
    Lazareva-Ulitsky B; Diemer K; Thomas PD
    Bioinformatics; 2005 May; 21(9):1876-90. PubMed ID: 15647305
    [TBL] [Abstract][Full Text] [Related]  

  • 18. High performance set of PseAAC and sequence based descriptors for protein classification.
    Nanni L; Brahnam S; Lumini A
    J Theor Biol; 2010 Sep; 266(1):1-10. PubMed ID: 20558184
    [TBL] [Abstract][Full Text] [Related]  

  • 19. An accurate alignment-free protein sequence comparator based on physicochemical properties of amino acids.
    Akbari Rokn Abadi S; Abdosalehi AS; Pouyamehr F; Koohi S
    Sci Rep; 2022 Jul; 12(1):11158. PubMed ID: 35778592
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Virus classification in 60-dimensional protein space.
    Li Y; Tian K; Yin C; He RL; Yau SS
    Mol Phylogenet Evol; 2016 Jun; 99():53-62. PubMed ID: 26988414
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 4.