BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

133 related articles for article (PubMed ID: 28605401)

  • 1. Comparison of pre-processing methods for Infinium HumanMethylation450 BeadChip array.
    Shiah YJ; Fraser M; Bristow RG; Boutros PC
    Bioinformatics; 2017 Oct; 33(20):3151-3157. PubMed ID: 28605401
    [TBL] [Abstract][Full Text] [Related]  

  • 2. [Genome-wide analysis of DNA methylation in prostate cancer using the technology of Infinium HumanMethylation450 BeadChip (HM450)].
    Babalyan KA; Sultanov R; Generozov EV; Zakharzhevskaya NB; Sharova EI; Peshkov MN; Vasilev AO; Govorov AV; Pushkar DY; Prilepskaya EA; Danilenko SA; Babikova EA; Larin AK; Govorun VM
    Vopr Onkol; 2016; 62(1):122-32. PubMed ID: 30444590
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A comparison of the whole genome approach of MeDIP-seq to the targeted approach of the Infinium HumanMethylation450 BeadChip(®) for methylome profiling.
    Clark C; Palta P; Joyce CJ; Scott C; Grundberg E; Deloukas P; Palotie A; Coffey AJ
    PLoS One; 2012; 7(11):e50233. PubMed ID: 23209683
    [TBL] [Abstract][Full Text] [Related]  

  • 4. SWAN: Subset-quantile within array normalization for illumina infinium HumanMethylation450 BeadChips.
    Maksimovic J; Gordon L; Oshlack A
    Genome Biol; 2012 Jun; 13(6):R44. PubMed ID: 22703947
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Analysis pipelines and packages for Infinium HumanMethylation450 BeadChip (450k) data.
    Morris TJ; Beck S
    Methods; 2015 Jan; 72():3-8. PubMed ID: 25233806
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Measuring the methylome in clinical samples: improved processing of the Infinium Human Methylation450 BeadChip Array.
    Pan H; Chen L; Dogra S; Teh AL; Tan JH; Lim YI; Lim YC; Jin S; Lee YK; Ng PY; Ong ML; Barton S; Chong YS; Meaney MJ; Gluckman PD; Stunkel W; Ding C; Holbrook JD
    Epigenetics; 2012 Oct; 7(10):1173-87. PubMed ID: 22964528
    [TBL] [Abstract][Full Text] [Related]  

  • 7. missMethyl: an R package for analyzing data from Illumina's HumanMethylation450 platform.
    Phipson B; Maksimovic J; Oshlack A
    Bioinformatics; 2016 Jan; 32(2):286-8. PubMed ID: 26424855
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Impact of SNPs on methylation readouts by Illumina Infinium HumanMethylation450 BeadChip Array: implications for comparative population studies.
    Daca-Roszak P; Pfeifer A; Żebracka-Gala J; Rusinek D; Szybińska A; Jarząb B; Witt M; Ziętkiewicz E
    BMC Genomics; 2015 Nov; 16():1003. PubMed ID: 26607064
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Complete pipeline for Infinium(®) Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation.
    Touleimat N; Tost J
    Epigenomics; 2012 Jun; 4(3):325-41. PubMed ID: 22690668
    [TBL] [Abstract][Full Text] [Related]  

  • 10. NanoStringNormCNV: pre-processing of NanoString CNV data.
    Sendorek DH; Lalonde E; Yao CQ; Sabelnykova VY; Bristow RG; Boutros PC
    Bioinformatics; 2018 Mar; 34(6):1034-1036. PubMed ID: 29112706
    [TBL] [Abstract][Full Text] [Related]  

  • 11. FastDMA: an infinium humanmethylation450 beadchip analyzer.
    Wu D; Gu J; Zhang MQ
    PLoS One; 2013; 8(9):e74275. PubMed ID: 24040221
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Positional effects revealed in Illumina methylation array and the impact on analysis.
    Jiao C; Zhang C; Dai R; Xia Y; Wang K; Giase G; Chen C; Liu C
    Epigenomics; 2018 May; 10(5):643-659. PubMed ID: 29469594
    [TBL] [Abstract][Full Text] [Related]  

  • 13. pETM: a penalized Exponential Tilt Model for analysis of correlated high-dimensional DNA methylation data.
    Sun H; Wang Y; Chen Y; Li Y; Wang S
    Bioinformatics; 2017 Jun; 33(12):1765-1772. PubMed ID: 28165116
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Comparison of methylation capture sequencing and Infinium MethylationEPIC array in peripheral blood mononuclear cells.
    Shu C; Zhang X; Aouizerat BE; Xu K
    Epigenetics Chromatin; 2020 Nov; 13(1):51. PubMed ID: 33228774
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A framework for analyzing DNA methylation data from Illumina Infinium HumanMethylation450 BeadChip.
    Wang Z; Wu X; Wang Y
    BMC Bioinformatics; 2018 Apr; 19(Suppl 5):115. PubMed ID: 29671397
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Critical evaluation of the Illumina MethylationEPIC BeadChip microarray for whole-genome DNA methylation profiling.
    Pidsley R; Zotenko E; Peters TJ; Lawrence MG; Risbridger GP; Molloy P; Van Djik S; Muhlhausler B; Stirzaker C; Clark SJ
    Genome Biol; 2016 Oct; 17(1):208. PubMed ID: 27717381
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Predicting CpG methylation levels by integrating Infinium HumanMethylation450 BeadChip array data.
    Fan S; Huang K; Ai R; Wang M; Wang W
    Genomics; 2016 Apr; 107(4):132-7. PubMed ID: 26921858
    [TBL] [Abstract][Full Text] [Related]  

  • 18. CopyNumber450kCancer: baseline correction for accurate copy number calling from the 450k methylation array.
    Marzouka NA; Nordlund J; Bäcklin CL; Lönnerholm G; Syvänen AC; Carlsson Almlöf J
    Bioinformatics; 2016 Apr; 32(7):1080-2. PubMed ID: 26553913
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Marmal-aid--a database for Infinium HumanMethylation450.
    Lowe R; Rakyan VK
    BMC Bioinformatics; 2013 Dec; 14():359. PubMed ID: 24330312
    [TBL] [Abstract][Full Text] [Related]  

  • 20. An evaluation of analysis pipelines for DNA methylation profiling using the Illumina HumanMethylation450 BeadChip platform.
    Marabita F; Almgren M; Lindholm ME; Ruhrmann S; Fagerström-Billai F; Jagodic M; Sundberg CJ; Ekström TJ; Teschendorff AE; Tegnér J; Gomez-Cabrero D
    Epigenetics; 2013 Mar; 8(3):333-46. PubMed ID: 23422812
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.