324 related articles for article (PubMed ID: 28605506)
1. Multi-locus and long amplicon sequencing approach to study microbial diversity at species level using the MinION™ portable nanopore sequencer.
Benítez-Páez A; Sanz Y
Gigascience; 2017 Jul; 6(7):1-12. PubMed ID: 28605506
[TBL] [Abstract][Full Text] [Related]
2. Species-level resolution of 16S rRNA gene amplicons sequenced through the MinION™ portable nanopore sequencer.
Benítez-Páez A; Portune KJ; Sanz Y
Gigascience; 2016; 5():4. PubMed ID: 26823973
[TBL] [Abstract][Full Text] [Related]
3. MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach.
Brown BL; Watson M; Minot SS; Rivera MC; Franklin RB
Gigascience; 2017 Mar; 6(3):1-10. PubMed ID: 28327976
[TBL] [Abstract][Full Text] [Related]
4. Bacterial and viral identification and differentiation by amplicon sequencing on the MinION nanopore sequencer.
Kilianski A; Haas JL; Corriveau EJ; Liem AT; Willis KL; Kadavy DR; Rosenzweig CN; Minot SS
Gigascience; 2015; 4():12. PubMed ID: 25815165
[TBL] [Abstract][Full Text] [Related]
5. Microbiota profiling with long amplicons using Nanopore sequencing: full-length 16S rRNA gene and the 16S-ITS-23S of the
Cuscó A; Catozzi C; Viñes J; Sanchez A; Francino O
F1000Res; 2018; 7():1755. PubMed ID: 30815250
[No Abstract] [Full Text] [Related]
6. A rapid approach to profiling diverse fungal communities using the MinION™ nanopore sequencer.
Mafune KK; Godfrey BJ; Vogt DJ; Vogt KA
Biotechniques; 2020 Feb; 68(2):72-78. PubMed ID: 31849245
[TBL] [Abstract][Full Text] [Related]
7. Full-length 16S rRNA gene amplicon analysis of human gut microbiota using MinION™ nanopore sequencing confers species-level resolution.
Matsuo Y; Komiya S; Yasumizu Y; Yasuoka Y; Mizushima K; Takagi T; Kryukov K; Fukuda A; Morimoto Y; Naito Y; Okada H; Bono H; Nakagawa S; Hirota K
BMC Microbiol; 2021 Jan; 21(1):35. PubMed ID: 33499799
[TBL] [Abstract][Full Text] [Related]
8. Rapid identification of pathogens from positive blood culture bottles with the MinION nanopore sequencer.
Ashikawa S; Tarumoto N; Imai K; Sakai J; Kodana M; Kawamura T; Ikebuchi K; Murakami T; Mitsutake K; Maesaki S; Maeda T
J Med Microbiol; 2018 Nov; 67(11):1589-1595. PubMed ID: 30311873
[TBL] [Abstract][Full Text] [Related]
9. A reference bacterial genome dataset generated on the MinION™ portable single-molecule nanopore sequencer.
Quick J; Quinlan AR; Loman NJ
Gigascience; 2014; 3():22. PubMed ID: 25386338
[TBL] [Abstract][Full Text] [Related]
10. The newest Oxford Nanopore R10.4.1 full-length 16S rRNA sequencing enables the accurate resolution of species-level microbial community profiling.
Zhang T; Li H; Ma S; Cao J; Liao H; Huang Q; Chen W
Appl Environ Microbiol; 2023 Oct; 89(10):e0060523. PubMed ID: 37800969
[TBL] [Abstract][Full Text] [Related]
11. NanoAmpli-Seq: a workflow for amplicon sequencing for mixed microbial communities on the nanopore sequencing platform.
Calus ST; Ijaz UZ; Pinto AJ
Gigascience; 2018 Dec; 7(12):. PubMed ID: 30476081
[TBL] [Abstract][Full Text] [Related]
12. High precision genome sequencing of engineered Gluconobacter oxydans 621H by combining long nanopore and short accurate Illumina reads.
Kranz A; Vogel A; Degner U; Kiefler I; Bott M; Usadel B; Polen T
J Biotechnol; 2017 Sep; 258():197-205. PubMed ID: 28433722
[TBL] [Abstract][Full Text] [Related]
13. A novel diagnostic method for malaria using loop-mediated isothermal amplification (LAMP) and MinION™ nanopore sequencer.
Imai K; Tarumoto N; Misawa K; Runtuwene LR; Sakai J; Hayashida K; Eshita Y; Maeda R; Tuda J; Murakami T; Maesaki S; Suzuki Y; Yamagishi J; Maeda T
BMC Infect Dis; 2017 Sep; 17(1):621. PubMed ID: 28903726
[TBL] [Abstract][Full Text] [Related]
14. Comparison of Illumina versus Nanopore 16S rRNA Gene Sequencing of the Human Nasal Microbiota.
Heikema AP; Horst-Kreft D; Boers SA; Jansen R; Hiltemann SD; de Koning W; Kraaij R; de Ridder MAJ; van Houten CB; Bont LJ; Stubbs AP; Hays JP
Genes (Basel); 2020 Sep; 11(9):. PubMed ID: 32967250
[TBL] [Abstract][Full Text] [Related]
15. Rapid bacterial identification by direct PCR amplification of 16S rRNA genes using the MinION™ nanopore sequencer.
Kai S; Matsuo Y; Nakagawa S; Kryukov K; Matsukawa S; Tanaka H; Iwai T; Imanishi T; Hirota K
FEBS Open Bio; 2019 Mar; 9(3):548-557. PubMed ID: 30868063
[TBL] [Abstract][Full Text] [Related]
16. Microbial Identification Using rRNA Operon Region: Database and Tool for Metataxonomics with Long-Read Sequence.
Seol D; Lim JS; Sung S; Lee YH; Jeong M; Cho S; Kwak W; Kim H
Microbiol Spectr; 2022 Apr; 10(2):e0201721. PubMed ID: 35352997
[TBL] [Abstract][Full Text] [Related]
17. Long-read MinION™ sequencing of 16S and 16S-ITS-23S rRNA genes provides species-level resolution of
Olivier SA; Bull MK; Strube ML; Murphy R; Ross T; Bowman JP; Chapman B
Front Microbiol; 2023; 14():1290756. PubMed ID: 38143859
[TBL] [Abstract][Full Text] [Related]
18. Comparison of Oxford Nanopore Technologies and Illumina MiSeq sequencing with mock communities and agricultural soil.
Stevens BM; Creed TB; Reardon CL; Manter DK
Sci Rep; 2023 Jun; 13(1):9323. PubMed ID: 37291169
[TBL] [Abstract][Full Text] [Related]
19. Comparison of R9.4.1/Kit10 and R10/Kit12 Oxford Nanopore flowcells and chemistries in bacterial genome reconstruction.
Sanderson ND; Kapel N; Rodger G; Webster H; Lipworth S; Street TL; Peto T; Crook D; Stoesser N
Microb Genom; 2023 Jan; 9(1):. PubMed ID: 36748454
[TBL] [Abstract][Full Text] [Related]
20. Genome assembly using Nanopore-guided long and error-free DNA reads.
Madoui MA; Engelen S; Cruaud C; Belser C; Bertrand L; Alberti A; Lemainque A; Wincker P; Aury JM
BMC Genomics; 2015 Apr; 16(1):327. PubMed ID: 25927464
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
