BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

112 related articles for article (PubMed ID: 28609295)

  • 1. clubber: removing the bioinformatics bottleneck in big data analyses.
    Miller M; Zhu C; Bromberg Y
    J Integr Bioinform; 2017 Jun; 14(2):. PubMed ID: 28609295
    [TBL] [Abstract][Full Text] [Related]  

  • 2. JMS: An Open Source Workflow Management System and Web-Based Cluster Front-End for High Performance Computing.
    Brown DK; Penkler DL; Musyoka TM; Bishop ÖT
    PLoS One; 2015; 10(8):e0134273. PubMed ID: 26280450
    [TBL] [Abstract][Full Text] [Related]  

  • 3. WImpiBLAST: web interface for mpiBLAST to help biologists perform large-scale annotation using high performance computing.
    Sharma P; Mantri SS
    PLoS One; 2014; 9(6):e101144. PubMed ID: 24979410
    [TBL] [Abstract][Full Text] [Related]  

  • 4. ELIXIR-IT HPC@CINECA: high performance computing resources for the bioinformatics community.
    Castrignanò T; Gioiosa S; Flati T; Cestari M; Picardi E; Chiara M; Fratelli M; Amente S; Cirilli M; Tangaro MA; Chillemi G; Pesole G; Zambelli F
    BMC Bioinformatics; 2020 Aug; 21(Suppl 10):352. PubMed ID: 32838759
    [TBL] [Abstract][Full Text] [Related]  

  • 5. MetaSAMS--a novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets.
    Zakrzewski M; Bekel T; Ander C; Pühler A; Rupp O; Stoye J; Schlüter A; Goesmann A
    J Biotechnol; 2013 Aug; 167(2):156-65. PubMed ID: 23026555
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Towards a HPC-oriented parallel implementation of a learning algorithm for bioinformatics applications.
    D'Angelo G; Rampone S
    BMC Bioinformatics; 2014; 15 Suppl 5(Suppl 5):S2. PubMed ID: 25077818
    [TBL] [Abstract][Full Text] [Related]  

  • 7. PoPLAR: Portal for Petascale Lifescience Applications and Research.
    Rekapalli B; Giblock P; Reardon C
    BMC Bioinformatics; 2013; 14 Suppl 9(Suppl 9):S3. PubMed ID: 23902523
    [TBL] [Abstract][Full Text] [Related]  

  • 8. birgHPC: creating instant computing clusters for bioinformatics and molecular dynamics.
    Chew TH; Joyce-Tan KH; Akma F; Shamsir MS
    Bioinformatics; 2011 May; 27(9):1320-1. PubMed ID: 21398666
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Performance and scaling behavior of bioinformatic applications in virtualization environments to create awareness for the efficient use of compute resources.
    Hanussek M; Bartusch F; Krüger J
    PLoS Comput Biol; 2021 Jul; 17(7):e1009244. PubMed ID: 34283824
    [TBL] [Abstract][Full Text] [Related]  

  • 10. LigandScout Remote: A New User-Friendly Interface for HPC and Cloud Resources.
    Kainrad T; Hunold S; Seidel T; Langer T
    J Chem Inf Model; 2019 Jan; 59(1):31-37. PubMed ID: 30540457
    [TBL] [Abstract][Full Text] [Related]  

  • 11. ClusterControl: a web interface for distributing and monitoring bioinformatics applications on a Linux cluster.
    Stocker G; Rieder D; Trajanoski Z
    Bioinformatics; 2004 Mar; 20(5):805-7. PubMed ID: 14751976
    [TBL] [Abstract][Full Text] [Related]  

  • 12. When cloud computing meets bioinformatics: a review.
    Zhou S; Liao R; Guan J
    J Bioinform Comput Biol; 2013 Oct; 11(5):1330002. PubMed ID: 24131049
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Profiling the BLAST bioinformatics application for load balancing on high-performance computing clusters.
    Cheng T; Chin PJ; Cha K; Petrick N; Mikailov M
    BMC Bioinformatics; 2022 Dec; 23(1):544. PubMed ID: 36526957
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Fate of Deepwater Horizon oil in Alabama's beach system: understanding physical evolution processes based on observational data.
    Hayworth JS; Prabakhar Clement T; John GF; Yin F
    Mar Pollut Bull; 2015 Jan; 90(1-2):95-105. PubMed ID: 25496697
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Search Engine for Antimicrobial Resistance: A Cloud Compatible Pipeline and Web Interface for Rapidly Detecting Antimicrobial Resistance Genes Directly from Sequence Data.
    Rowe W; Baker KS; Verner-Jeffreys D; Baker-Austin C; Ryan JJ; Maskell D; Pearce G
    PLoS One; 2015; 10(7):e0133492. PubMed ID: 26197475
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Windows .NET Network Distributed Basic Local Alignment Search Toolkit (W.ND-BLAST).
    Dowd SE; Zaragoza J; Rodriguez JR; Oliver MJ; Payton PR
    BMC Bioinformatics; 2005 Apr; 6():93. PubMed ID: 15819992
    [TBL] [Abstract][Full Text] [Related]  

  • 17. qPortal: A platform for data-driven biomedical research.
    Mohr C; Friedrich A; Wojnar D; Kenar E; Polatkan AC; Codrea MC; Czemmel S; Kohlbacher O; Nahnsen S
    PLoS One; 2018; 13(1):e0191603. PubMed ID: 29352322
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Advances in distributed computing with modern drug discovery.
    Banegas-Luna AJ; Imbernón B; Llanes Castro A; Pérez-Garrido A; Cerón-Carrasco JP; Gesing S; Merelli I; D'Agostino D; Pérez-Sánchez H
    Expert Opin Drug Discov; 2019 Jan; 14(1):9-22. PubMed ID: 30484337
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Scaling predictive modeling in drug development with cloud computing.
    Moghadam BT; Alvarsson J; Holm M; Eklund M; Carlsson L; Spjuth O
    J Chem Inf Model; 2015 Jan; 55(1):19-25. PubMed ID: 25493610
    [TBL] [Abstract][Full Text] [Related]  

  • 20. PyBDA: a command line tool for automated analysis of big biological data sets.
    Dirmeier S; Emmenlauer M; Dehio C; Beerenwinkel N
    BMC Bioinformatics; 2019 Nov; 20(1):564. PubMed ID: 31718539
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.