BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

301 related articles for article (PubMed ID: 28610458)

  • 1. Large-scale parallel genome assembler over cloud computing environment.
    Das AK; Koppa PK; Goswami S; Platania R; Park SJ
    J Bioinform Comput Biol; 2017 Jun; 15(3):1740003. PubMed ID: 28610458
    [TBL] [Abstract][Full Text] [Related]  

  • 2. CloudDOE: a user-friendly tool for deploying Hadoop clouds and analyzing high-throughput sequencing data with MapReduce.
    Chung WC; Chen CC; Ho JM; Lin CY; Hsu WL; Wang YC; Lee DT; Lai F; Huang CW; Chang YJ
    PLoS One; 2014; 9(6):e98146. PubMed ID: 24897343
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A quantitative assessment of the Hadoop framework for analyzing massively parallel DNA sequencing data.
    Siretskiy A; Sundqvist T; Voznesenskiy M; Spjuth O
    Gigascience; 2015; 4():26. PubMed ID: 26045962
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Parallelized short read assembly of large genomes using de Bruijn graphs.
    Liu Y; Schmidt B; Maskell DL
    BMC Bioinformatics; 2011 Aug; 12():354. PubMed ID: 21867511
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Cloud-BS: A MapReduce-based bisulfite sequencing aligner on cloud.
    Choi J; Park Y; Kim S; Chae H
    J Bioinform Comput Biol; 2018 Dec; 16(6):1840028. PubMed ID: 30567473
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Cloud computing applications for biomedical science: A perspective.
    Navale V; Bourne PE
    PLoS Comput Biol; 2018 Jun; 14(6):e1006144. PubMed ID: 29902176
    [TBL] [Abstract][Full Text] [Related]  

  • 7. GT-WGS: an efficient and economic tool for large-scale WGS analyses based on the AWS cloud service.
    Wang Y; Li G; Ma M; He F; Song Z; Zhang W; Wu C
    BMC Genomics; 2018 Jan; 19(Suppl 1):959. PubMed ID: 29363427
    [TBL] [Abstract][Full Text] [Related]  

  • 8. BAMSI: a multi-cloud service for scalable distributed filtering of massive genome data.
    Ausmees K; John A; Toor SZ; Hellander A; Nettelblad C
    BMC Bioinformatics; 2018 Jun; 19(1):240. PubMed ID: 29940842
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Parallel MapReduce: Maximizing Cloud Resource Utilization and Performance Improvement Using Parallel Execution Strategies.
    Al-Absi AA; Al-Sammarraie NA; Shaher Yafooz WM; Kang DK
    Biomed Res Int; 2018; 2018():7501042. PubMed ID: 30417014
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Applications of the MapReduce programming framework to clinical big data analysis: current landscape and future trends.
    Mohammed EA; Far BH; Naugler C
    BioData Min; 2014; 7():22. PubMed ID: 25383096
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A Fast Synthetic Aperture Radar Raw Data Simulation Using Cloud Computing.
    Li Z; Su D; Zhu H; Li W; Zhang F; Li R
    Sensors (Basel); 2017 Jan; 17(1):. PubMed ID: 28075343
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A (fire)cloud-based DNA methylation data preprocessing and quality control platform.
    Kangeyan D; Dunford A; Iyer S; Stewart C; Hanna M; Getz G; Aryee MJ
    BMC Bioinformatics; 2019 Mar; 20(1):160. PubMed ID: 30922215
    [TBL] [Abstract][Full Text] [Related]  

  • 13. SWAP-Assembler: scalable and efficient genome assembly towards thousands of cores.
    Meng J; Wang B; Wei Y; Feng S; Balaji P
    BMC Bioinformatics; 2014; 15 Suppl 9(Suppl 9):S2. PubMed ID: 25253533
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Rapid protein alignment in the cloud: HAMOND combines fast DIAMOND alignments with Hadoop parallelism.
    Yu J; Blom J; Sczyrba A; Goesmann A
    J Biotechnol; 2017 Sep; 257():58-60. PubMed ID: 28232083
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A hybrid computational strategy to address WGS variant analysis in >5000 samples.
    Huang Z; Rustagi N; Veeraraghavan N; Carroll A; Gibbs R; Boerwinkle E; Venkata MG; Yu F
    BMC Bioinformatics; 2016 Sep; 17(1):361. PubMed ID: 27612449
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Long Read Alignment with Parallel MapReduce Cloud Platform.
    Al-Absi AA; Kang DK
    Biomed Res Int; 2015; 2015():807407. PubMed ID: 26839887
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Heterogeneous Cloud Framework for Big Data Genome Sequencing.
    Wang C; Li X; Chen P; Wang A; Zhou X; Yu H
    IEEE/ACM Trans Comput Biol Bioinform; 2015; 12(1):166-78. PubMed ID: 26357087
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Edge, Fog, and Cloud Against Disease: The Potential of High-Performance Cloud Computing for Pharma Drug Discovery.
    Bonde B
    Methods Mol Biol; 2024; 2716():181-202. PubMed ID: 37702940
    [TBL] [Abstract][Full Text] [Related]  

  • 19. BioPig: a Hadoop-based analytic toolkit for large-scale sequence data.
    Nordberg H; Bhatia K; Wang K; Wang Z
    Bioinformatics; 2013 Dec; 29(23):3014-9. PubMed ID: 24021384
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Scalable Genome Assembly through Parallel de Bruijn Graph Construction for Multiple k-mers.
    Mahadik K; Wright C; Kulkarni M; Bagchi S; Chaterji S
    Sci Rep; 2019 Oct; 9(1):14882. PubMed ID: 31619717
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 16.