397 related articles for article (PubMed ID: 28637243)
1. Nanopore sequencing data analysis: state of the art, applications and challenges.
Magi A; Semeraro R; Mingrino A; Giusti B; D'Aurizio R
Brief Bioinform; 2018 Nov; 19(6):1256-1272. PubMed ID: 28637243
[TBL] [Abstract][Full Text] [Related]
2. Benchmarking of de novo assembly algorithms for Nanopore data reveals optimal performance of OLC approaches.
Cherukuri Y; Janga SC
BMC Genomics; 2016 Aug; 17 Suppl 7(Suppl 7):507. PubMed ID: 27556636
[TBL] [Abstract][Full Text] [Related]
3. de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer.
Istace B; Friedrich A; d'Agata L; Faye S; Payen E; Beluche O; Caradec C; Davidas S; Cruaud C; Liti G; Lemainque A; Engelen S; Wincker P; Schacherer J; Aury JM
Gigascience; 2017 Feb; 6(2):1-13. PubMed ID: 28369459
[TBL] [Abstract][Full Text] [Related]
4. Characterization of MinION nanopore data for resequencing analyses.
Magi A; Giusti B; Tattini L
Brief Bioinform; 2017 Nov; 18(6):940-953. PubMed ID: 27559152
[TBL] [Abstract][Full Text] [Related]
5. Oxford Nanopore MinION Sequencing and Genome Assembly.
Lu H; Giordano F; Ning Z
Genomics Proteomics Bioinformatics; 2016 Oct; 14(5):265-279. PubMed ID: 27646134
[TBL] [Abstract][Full Text] [Related]
6. Genome assembly using Nanopore-guided long and error-free DNA reads.
Madoui MA; Engelen S; Cruaud C; Belser C; Bertrand L; Alberti A; Lemainque A; Wincker P; Aury JM
BMC Genomics; 2015 Apr; 16(1):327. PubMed ID: 25927464
[TBL] [Abstract][Full Text] [Related]
7. ECNano: A cost-effective workflow for target enrichment sequencing and accurate variant calling on 4800 clinically significant genes using a single MinION flowcell.
Leung AW; Leung HC; Wong CL; Zheng ZX; Lui WW; Luk HM; Lo IF; Luo R; Lam TW
BMC Med Genomics; 2022 Mar; 15(1):43. PubMed ID: 35246132
[TBL] [Abstract][Full Text] [Related]
8. High precision genome sequencing of engineered Gluconobacter oxydans 621H by combining long nanopore and short accurate Illumina reads.
Kranz A; Vogel A; Degner U; Kiefler I; Bott M; Usadel B; Polen T
J Biotechnol; 2017 Sep; 258():197-205. PubMed ID: 28433722
[TBL] [Abstract][Full Text] [Related]
9. Forensic nanopore sequencing of microhaplotype markers using QitanTech's QNome.
Wang Z; Qin L; Liu J; Jiang L; Zou X; Chen X; Song F; Dai H; Hou Y
Forensic Sci Int Genet; 2022 Mar; 57():102657. PubMed ID: 34973558
[TBL] [Abstract][Full Text] [Related]
10. Assessing the performance of the Oxford Nanopore Technologies MinION.
Laver T; Harrison J; O'Neill PA; Moore K; Farbos A; Paszkiewicz K; Studholme DJ
Biomol Detect Quantif; 2015 Mar; 3():1-8. PubMed ID: 26753127
[TBL] [Abstract][Full Text] [Related]
11. Systematic and stochastic influences on the performance of the MinION nanopore sequencer across a range of nucleotide bias.
Krishnakumar R; Sinha A; Bird SW; Jayamohan H; Edwards HS; Schoeniger JS; Patel KD; Branda SS; Bartsch MS
Sci Rep; 2018 Feb; 8(1):3159. PubMed ID: 29453452
[TBL] [Abstract][Full Text] [Related]
12. Adaptation of Oxford Nanopore technology for hepatitis C whole genome sequencing and identification of within-host viral variants.
Riaz N; Leung P; Barton K; Smith MA; Carswell S; Bull R; Lloyd AR; Rodrigo C
BMC Genomics; 2021 Mar; 22(1):148. PubMed ID: 33653280
[TBL] [Abstract][Full Text] [Related]
13. De novo sequencing and variant calling with nanopores using PoreSeq.
Szalay T; Golovchenko JA
Nat Biotechnol; 2015 Oct; 33(10):1087-91. PubMed ID: 26352647
[TBL] [Abstract][Full Text] [Related]
14. Approaches to Whole Mitochondrial Genome Sequencing on the Oxford Nanopore MinION.
Zascavage RR; Hall CL; Thorson K; Mahmoud M; Sedlazeck FJ; Planz JV
Curr Protoc Hum Genet; 2019 Dec; 104(1):e94. PubMed ID: 31743587
[TBL] [Abstract][Full Text] [Related]
15. NanoDJ: a Dockerized Jupyter notebook for interactive Oxford Nanopore MinION sequence manipulation and genome assembly.
Rodríguez-Pérez H; Hernández-Beeftink T; Lorenzo-Salazar JM; Roda-García JL; Pérez-González CJ; Colebrook M; Flores C
BMC Bioinformatics; 2019 May; 20(1):234. PubMed ID: 31072312
[TBL] [Abstract][Full Text] [Related]
16. Mapping and phasing of structural variation in patient genomes using nanopore sequencing.
Cretu Stancu M; van Roosmalen MJ; Renkens I; Nieboer MM; Middelkamp S; de Ligt J; Pregno G; Giachino D; Mandrile G; Espejo Valle-Inclan J; Korzelius J; de Bruijn E; Cuppen E; Talkowski ME; Marschall T; de Ridder J; Kloosterman WP
Nat Commun; 2017 Nov; 8(1):1326. PubMed ID: 29109544
[TBL] [Abstract][Full Text] [Related]
17. Oxford Nanopore sequencing, hybrid error correction, and de novo assembly of a eukaryotic genome.
Goodwin S; Gurtowski J; Ethe-Sayers S; Deshpande P; Schatz MC; McCombie WR
Genome Res; 2015 Nov; 25(11):1750-6. PubMed ID: 26447147
[TBL] [Abstract][Full Text] [Related]
18. Full-Length HLA Class I Genotyping with the MinION Nanopore Sequencer.
Lang K; Surendranath V; Quenzel P; Schöfl G; Schmidt AH; Lange V
Methods Mol Biol; 2018; 1802():155-162. PubMed ID: 29858807
[TBL] [Abstract][Full Text] [Related]
19. Increasing the accuracy of nanopore DNA sequencing using a time-varying cross membrane voltage.
Noakes MT; Brinkerhoff H; Laszlo AH; Derrington IM; Langford KW; Mount JW; Bowman JL; Baker KS; Doering KM; Tickman BI; Gundlach JH
Nat Biotechnol; 2019 Jun; 37(6):651-656. PubMed ID: 31011178
[TBL] [Abstract][Full Text] [Related]
20. A world of opportunities with nanopore sequencing.
Leggett RM; Clark MD
J Exp Bot; 2017 Nov; 68(20):5419-5429. PubMed ID: 28992056
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]