These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

160 related articles for article (PubMed ID: 28642587)

  • 1. Systematic comparison of two whole-genome amplification methods for targeted next-generation sequencing using frozen and FFPE normal and cancer tissues.
    Mendez P; Fang LT; Jablons DM; Kim IJ
    Sci Rep; 2017 Jun; 7(1):4055. PubMed ID: 28642587
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Deep targeted sequencing of cytological tumor cells using whole genome amplification.
    Amemiya K; Hirotsu Y; Mochizuki H; Higuchi R; Nakagomi T; Goto T; Oyama T; Kondo T; Omata M
    Cancer Cytopathol; 2023 Jan; 131(1):58-68. PubMed ID: 36219530
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Targeted or whole genome sequencing of formalin fixed tissue samples: potential applications in cancer genomics.
    Munchel S; Hoang Y; Zhao Y; Cottrell J; Klotzle B; Godwin AK; Koestler D; Beyerlein P; Fan JB; Bibikova M; Chien J
    Oncotarget; 2015 Sep; 6(28):25943-61. PubMed ID: 26305677
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Performance comparison of three DNA extraction kits on human whole-exome data from formalin-fixed paraffin-embedded normal and tumor samples.
    Bonnet E; Moutet ML; Baulard C; Bacq-Daian D; Sandron F; Mesrob L; Fin B; Delépine M; Palomares MA; Jubin C; Blanché H; Meyer V; Boland A; Olaso R; Deleuze JF
    PLoS One; 2018; 13(4):e0195471. PubMed ID: 29621323
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Large fragment Bst DNA polymerase for whole genome amplification of DNA from formalin-fixed paraffin-embedded tissues.
    Aviel-Ronen S; Qi Zhu C; Coe BP; Liu N; Watson SK; Lam WL; Tsao MS
    BMC Genomics; 2006 Dec; 7():312. PubMed ID: 17156491
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Array CGH using whole genome amplification of fresh-frozen and formalin-fixed, paraffin-embedded tumor DNA.
    Little SE; Vuononvirta R; Reis-Filho JS; Natrajan R; Iravani M; Fenwick K; Mackay A; Ashworth A; Pritchard-Jones K; Jones C
    Genomics; 2006 Feb; 87(2):298-306. PubMed ID: 16271290
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Next-generation sequencing of RNA and DNA isolated from paired fresh-frozen and formalin-fixed paraffin-embedded samples of human cancer and normal tissue.
    Hedegaard J; Thorsen K; Lund MK; Hein AM; Hamilton-Dutoit SJ; Vang S; Nordentoft I; Birkenkamp-Demtröder K; Kruhøffer M; Hager H; Knudsen B; Andersen CL; Sørensen KD; Pedersen JS; Ørntoft TF; Dyrskjøt L
    PLoS One; 2014; 9(5):e98187. PubMed ID: 24878701
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Bioinformatics and DNA-extraction strategies to reliably detect genetic variants from FFPE breast tissue samples.
    Bhagwate AV; Liu Y; Winham SJ; McDonough SJ; Stallings-Mann ML; Heinzen EP; Davila JI; Vierkant RA; Hoskin TL; Frost M; Carter JM; Radisky DC; Cunningham JM; Degnim AC; Wang C
    BMC Genomics; 2019 Sep; 20(1):689. PubMed ID: 31477010
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Whole exome sequencing (WES) on formalin-fixed, paraffin-embedded (FFPE) tumor tissue in gastrointestinal stromal tumors (GIST).
    Astolfi A; Urbini M; Indio V; Nannini M; Genovese CG; Santini D; Saponara M; Mandrioli A; Ercolani G; Brandi G; Biasco G; Pantaleo MA
    BMC Genomics; 2015 Nov; 16():892. PubMed ID: 26531060
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Whole genome amplification of DNA extracted from FFPE tissues.
    Bosso M; Al-Mulla F
    Methods Mol Biol; 2011; 724():161-80. PubMed ID: 21370013
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The impact of RNA extraction method on accurate RNA sequencing from formalin-fixed paraffin-embedded tissues.
    Marczyk M; Fu C; Lau R; Du L; Trevarton AJ; Sinn BV; Gould RE; Pusztai L; Hatzis C; Symmans WF
    BMC Cancer; 2019 Dec; 19(1):1189. PubMed ID: 31805884
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Assessment of REPLI-g Multiple Displacement Whole Genome Amplification (WGA) Techniques for Metagenomic Applications.
    Ahsanuddin S; Afshinnekoo E; Gandara J; Hakyemezoğlu M; Bezdan D; Minot S; Greenfield N; Mason CE
    J Biomol Tech; 2017 Apr; 28(1):46-55. PubMed ID: 28344519
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Targeted Next Generation Sequencing as a Reliable Diagnostic Assay for the Detection of Somatic Mutations in Tumours Using Minimal DNA Amounts from Formalin Fixed Paraffin Embedded Material.
    de Leng WW; Gadellaa-van Hooijdonk CG; Barendregt-Smouter FA; Koudijs MJ; Nijman I; Hinrichs JW; Cuppen E; van Lieshout S; Loberg RD; de Jonge M; Voest EE; de Weger RA; Steeghs N; Langenberg MH; Sleijfer S; Willems SM; Lolkema MP
    PLoS One; 2016; 11(2):e0149405. PubMed ID: 26919633
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Performance comparison of two commercial human whole-exome capture systems on formalin-fixed paraffin-embedded lung adenocarcinoma samples.
    Bonfiglio S; Vanni I; Rossella V; Truini A; Lazarevic D; Dal Bello MG; Alama A; Mora M; Rijavec E; Genova C; Cittaro D; Grossi F; Coco S
    BMC Cancer; 2016 Aug; 16(1):692. PubMed ID: 27578032
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Comparison of Accuracy of Whole-Exome Sequencing with Formalin-Fixed Paraffin-Embedded and Fresh Frozen Tissue Samples.
    Oh E; Choi YL; Kwon MJ; Kim RN; Kim YJ; Song JY; Jung KS; Shin YK
    PLoS One; 2015; 10(12):e0144162. PubMed ID: 26641479
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Next-Generation Sequencing Using S1 Nuclease for Poor-Quality Formalin-Fixed, Paraffin-Embedded Tumor Specimens.
    Chun SM; Sung CO; Jeon H; Kim TI; Lee JY; Park H; Kim Y; Kim D; Jang SJ
    J Mol Diagn; 2018 Nov; 20(6):802-811. PubMed ID: 30055350
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Robustness of a Cancer Profiling Test Using Formalin-fixed Paraffin Embedded Tumor Specimens.
    Ito S; Sato I; Mochizuki M; Yamaguchi K; Tamai K; Minato T; Tanuma N; Shima H; Yasuda J
    Anticancer Res; 2021 Mar; 41(3):1341-1348. PubMed ID: 33788725
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Performance of non-formalin fixed paraffin embedded samples in hybrid capture and amplicon next-generation sequencing panels.
    Meireles SI; Cruz MV; de Godoy CD; de Testagrossa L
    Diagn Cytopathol; 2024 Mar; 52(3):171-182. PubMed ID: 38124281
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Evaluation of the Use of Formalin-Fixed and Paraffin-Embedded Archive Gastric Tissues for Microbiota Characterization Using Next-Generation Sequencing.
    Pinto-Ribeiro I; Ferreira RM; Pereira-Marques J; Pinto V; Macedo G; Carneiro F; Figueiredo C
    Int J Mol Sci; 2020 Feb; 21(3):. PubMed ID: 32046034
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Genome-wide massively parallel sequencing of formaldehyde fixed-paraffin embedded (FFPE) tumor tissues for copy-number- and mutation-analysis.
    Schweiger MR; Kerick M; Timmermann B; Albrecht MW; Borodina T; Parkhomchuk D; Zatloukal K; Lehrach H
    PLoS One; 2009; 4(5):e5548. PubMed ID: 19440246
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.