These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

122 related articles for article (PubMed ID: 28649712)

  • 1. Cross-platform compatibility of de novo-aligned SNPs in a nonmodel butterfly genus.
    Campbell EO; Davis CS; Dupuis JR; Muirhead K; Sperling FAH
    Mol Ecol Resour; 2017 Nov; 17(6):e84-e93. PubMed ID: 28649712
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Double-digest RAD sequencing using Ion Proton semiconductor platform (ddRADseq-ion) with nonmodel organisms.
    Recknagel H; Jacobs A; Herzyk P; Elmer KR
    Mol Ecol Resour; 2015 Nov; 15(6):1316-29. PubMed ID: 25808755
    [TBL] [Abstract][Full Text] [Related]  

  • 3. SNP discovery in nonmodel organisms: strand bias and base-substitution errors reduce conversion rates.
    Gonçalves da Silva A; Barendse W; Kijas JW; Barris WC; McWilliam S; Bunch RJ; McCullough R; Harrison B; Hoelzel AR; England PR
    Mol Ecol Resour; 2015 Jul; 15(4):723-36. PubMed ID: 25388640
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Genotyping for Species Identification and Diversity Assessment Using Double-Digest Restriction Site-Associated DNA Sequencing (ddRAD-Seq).
    Severn-Ellis AA; Scheben A; Neik TX; Saad NSM; Pradhan A; Batley J
    Methods Mol Biol; 2020; 2107():159-187. PubMed ID: 31893447
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Finding the right coverage: the impact of coverage and sequence quality on single nucleotide polymorphism genotyping error rates.
    Fountain ED; Pauli JN; Reid BN; Palsbøll PJ; Peery MZ
    Mol Ecol Resour; 2016 Jul; 16(4):966-78. PubMed ID: 26946083
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Genome-Wide SNP Calling from Genotyping by Sequencing (GBS) Data: A Comparison of Seven Pipelines and Two Sequencing Technologies.
    Torkamaneh D; Laroche J; Belzile F
    PLoS One; 2016; 11(8):e0161333. PubMed ID: 27547936
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Performance and precision of double digestion RAD (ddRAD) genotyping in large multiplexed datasets of marine fish species.
    Maroso F; Hillen JEJ; Pardo BG; Gkagkavouzis K; Coscia I; Hermida M; Franch R; Hellemans B; Van Houdt J; Simionati B; Taggart JB; Nielsen EE; Maes G; Ciavaglia SA; Webster LMI; Volckaert FAM; Martinez P; Bargelloni L; Ogden R;
    Mar Genomics; 2018 Jun; 39():64-72. PubMed ID: 29496460
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Double-digest RAD-sequencing: do pre- and post-sequencing protocol parameters impact biological results?
    Cumer T; Pouchon C; Boyer F; Yannic G; Rioux D; Bonin A; Capblancq T
    Mol Genet Genomics; 2021 Mar; 296(2):457-471. PubMed ID: 33469716
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Targeted resequencing of coding DNA sequences for SNP discovery in nonmodel species.
    Förster DW; Bull JK; Lenz D; Autenrieth M; Paijmans JLA; Kraus RHS; Nowak C; Bayerl H; Kuehn R; Saveljev AP; Sindičić M; Hofreiter M; Schmidt K; Fickel J
    Mol Ecol Resour; 2018 Nov; 18(6):1356-1373. PubMed ID: 29978939
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Low-depth genotyping-by-sequencing (GBS) in a bovine population: strategies to maximize the selection of high quality genotypes and the accuracy of imputation.
    Brouard JS; Boyle B; Ibeagha-Awemu EM; Bissonnette N
    BMC Genet; 2017 Apr; 18(1):32. PubMed ID: 28381212
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Genotyping-by-Sequencing Technology in Plant Taxonomy and Phylogeny.
    Favre F; Jourda C; Besse P; Charron C
    Methods Mol Biol; 2021; 2222():167-178. PubMed ID: 33301094
    [TBL] [Abstract][Full Text] [Related]  

  • 12. An improved genotyping by sequencing (GBS) approach offering increased versatility and efficiency of SNP discovery and genotyping.
    Sonah H; Bastien M; Iquira E; Tardivel A; Légaré G; Boyle B; Normandeau É; Laroche J; Larose S; Jean M; Belzile F
    PLoS One; 2013; 8(1):e54603. PubMed ID: 23372741
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Genotyping-in-Thousands by sequencing (GT-seq): A cost effective SNP genotyping method based on custom amplicon sequencing.
    Campbell NR; Harmon SA; Narum SR
    Mol Ecol Resour; 2015 Jul; 15(4):855-67. PubMed ID: 25476721
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Genotyping by multiplexed sequencing (GMS): A customizable platform for genomic selection.
    Ruff TM; Marston EJ; Eagle JD; Sthapit SR; Hooker MA; Skinner DZ; See DR
    PLoS One; 2020; 15(5):e0229207. PubMed ID: 32357171
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Simple SNP-based minimal marker genotyping for Humulus lupulus L. identification and variety validation.
    Henning JA; Coggins J; Peterson M
    BMC Res Notes; 2015 Oct; 8():542. PubMed ID: 26438052
    [TBL] [Abstract][Full Text] [Related]  

  • 16. ddRAD sequencing-based identification of inter-genepool SNPs and association analysis in Brassica juncea.
    Sudan J; Singh R; Sharma S; Salgotra RK; Sharma V; Singh G; Sharma I; Sharma S; Gupta SK; Zargar SM
    BMC Plant Biol; 2019 Dec; 19(1):594. PubMed ID: 31888485
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Fast and cost-effective single nucleotide polymorphism (SNP) detection in the absence of a reference genome using semideep next-generation Random Amplicon Sequencing (RAMseq).
    Bayerl H; Kraus RHS; Nowak C; Foerster DW; Fickel J; Kuehn R
    Mol Ecol Resour; 2018 Jan; 18(1):107-117. PubMed ID: 28921927
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Sequence-based genotyping for marker discovery and co-dominant scoring in germplasm and populations.
    Truong HT; Ramos AM; Yalcin F; de Ruiter M; van der Poel HJ; Huvenaars KH; Hogers RC; van Enckevort LJ; Janssen A; van Orsouw NJ; van Eijk MJ
    PLoS One; 2012; 7(5):e37565. PubMed ID: 22662172
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Haplotyping RAD loci: an efficient method to filter paralogs and account for physical linkage.
    Willis SC; Hollenbeck CM; Puritz JB; Gold JR; Portnoy DS
    Mol Ecol Resour; 2017 Sep; 17(5):955-965. PubMed ID: 28042915
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Optimized double-digest genotyping by sequencing (ddGBS) method with high-density SNP markers and high genotyping accuracy for chickens.
    Wang Y; Cao X; Zhao Y; Fei J; Hu X; Li N
    PLoS One; 2017; 12(6):e0179073. PubMed ID: 28598985
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.