382 related articles for article (PubMed ID: 28655339)
1. India Allele Finder: a web-based annotation tool for identifying common alleles in next-generation sequencing data of Indian origin.
Zhang JF; James F; Shukla A; Girisha KM; Paciorkowski AR
BMC Res Notes; 2017 Jun; 10(1):233. PubMed ID: 28655339
[TBL] [Abstract][Full Text] [Related]
2. IndiGenomes: a comprehensive resource of genetic variants from over 1000 Indian genomes.
Jain A; Bhoyar RC; Pandhare K; Mishra A; Sharma D; Imran M; Senthivel V; Divakar MK; Rophina M; Jolly B; Batra A; Sharma S; Siwach S; Jadhao AG; Palande NV; Jha GN; Ashrafi N; Mishra PK; A K V; Jain S; Dash D; Kumar NS; Vanlallawma A; Sarma RJ; Chhakchhuak L; Kalyanaraman S; Mahadevan R; Kandasamy S; B M P; Rajagopal RE; J ER; P ND; Bajaj A; Gupta V; Mathew S; Goswami S; Mangla M; Prakash S; Joshi K; S S; Gajjar D; Soraisham R; Yadav R; Devi YS; Gupta A; Mukerji M; Ramalingam S; B K B; Scaria V; Sivasubbu S
Nucleic Acids Res; 2021 Jan; 49(D1):D1225-D1232. PubMed ID: 33095885
[TBL] [Abstract][Full Text] [Related]
3. Genomic variant annotation and prioritization with ANNOVAR and wANNOVAR.
Yang H; Wang K
Nat Protoc; 2015 Oct; 10(10):1556-66. PubMed ID: 26379229
[TBL] [Abstract][Full Text] [Related]
4. Human genetic variation database, a reference database of genetic variations in the Japanese population.
Higasa K; Miyake N; Yoshimura J; Okamura K; Niihori T; Saitsu H; Doi K; Shimizu M; Nakabayashi K; Aoki Y; Tsurusaki Y; Morishita S; Kawaguchi T; Migita O; Nakayama K; Nakashima M; Mitsui J; Narahara M; Hayashi K; Funayama R; Yamaguchi D; Ishiura H; Ko WY; Hata K; Nagashima T; Yamada R; Matsubara Y; Umezawa A; Tsuji S; Matsumoto N; Matsuda F
J Hum Genet; 2016 Jun; 61(6):547-53. PubMed ID: 26911352
[TBL] [Abstract][Full Text] [Related]
5. Genome analysis and knowledge-driven variant interpretation with TGex.
Dahary D; Golan Y; Mazor Y; Zelig O; Barshir R; Twik M; Iny Stein T; Rosner G; Kariv R; Chen F; Zhang Q; Shen Y; Safran M; Lancet D; Fishilevich S
BMC Med Genomics; 2019 Dec; 12(1):200. PubMed ID: 31888639
[TBL] [Abstract][Full Text] [Related]
6. A community-based resource for automatic exome variant-calling and annotation in Mendelian disorders.
Mutarelli M; Marwah V; Rispoli R; Carrella D; Dharmalingam G; Oliva G; di Bernardo D
BMC Genomics; 2014; 15 Suppl 3(Suppl 3):S5. PubMed ID: 25078076
[TBL] [Abstract][Full Text] [Related]
7. Accurately annotate compound effects of genetic variants using a context-sensitive framework.
Cheng SJ; Shi FY; Liu H; Ding Y; Jiang S; Liang N; Gao G
Nucleic Acids Res; 2017 Jun; 45(10):e82. PubMed ID: 28158838
[TBL] [Abstract][Full Text] [Related]
8. Variant Call Format-Diagnostic Annotation and Reporting Tool: A Customizable Analysis Pipeline for Identification of Clinically Relevant Genetic Variants in Next-Generation Sequencing Data.
Benton MC; Smith RA; Haupt LM; Sutherland HG; Dunn PJ; Albury CL; Maksemous N; Lea R; Griffiths L
J Mol Diagn; 2019 Nov; 21(6):951-960. PubMed ID: 31442673
[TBL] [Abstract][Full Text] [Related]
9. Open-Sourced CIViC Annotation Pipeline to Identify and Annotate Clinically Relevant Variants Using Single-Molecule Molecular Inversion Probes.
Barnell EK; Waalkes A; Mosior MC; Penewit K; Cotto KC; Danos AM; Sheta LM; Campbell KM; Krysiak K; Rieke D; Spies NC; Skidmore ZL; Pritchard CC; Fehniger TA; Uppaluri R; Govindan R; Griffith M; Salipante SJ; Griffith OL
JCO Clin Cancer Inform; 2019 Oct; 3():1-12. PubMed ID: 31618044
[TBL] [Abstract][Full Text] [Related]
10. Variant Calling From Next Generation Sequence Data.
Hansen NF
Methods Mol Biol; 2016; 1418():209-24. PubMed ID: 27008017
[TBL] [Abstract][Full Text] [Related]
11. Current trend of annotating single nucleotide variation in humans--A case study on SNVrap.
Li MJ; Wang J
Methods; 2015 Jun; 79-80():32-40. PubMed ID: 25308971
[TBL] [Abstract][Full Text] [Related]
12. Cruxome: a powerful tool for annotating, interpreting and reporting genetic variants.
Han Q; Yang Y; Wu S; Liao Y; Zhang S; Liang H; Cram DS; Zhang Y
BMC Genomics; 2021 Jun; 22(1):407. PubMed ID: 34082700
[TBL] [Abstract][Full Text] [Related]
13. FEATnotator: A tool for integrated annotation of sequence features and variation, facilitating interpretation in genomics experiments.
Podicheti R; Mockaitis K
Methods; 2015 Jun; 79-80():11-7. PubMed ID: 25934264
[TBL] [Abstract][Full Text] [Related]
14. VarAFT: a variant annotation and filtration system for human next generation sequencing data.
Desvignes JP; Bartoli M; Delague V; Krahn M; Miltgen M; Béroud C; Salgado D
Nucleic Acids Res; 2018 Jul; 46(W1):W545-W553. PubMed ID: 29860484
[TBL] [Abstract][Full Text] [Related]
15. al mena: a comprehensive resource of human genetic variants integrating genomes and exomes from Arab, Middle Eastern and North African populations.
Koshy R; Ranawat A; Scaria V
J Hum Genet; 2017 Oct; 62(10):889-894. PubMed ID: 28638141
[TBL] [Abstract][Full Text] [Related]
16. Gene and Variant Annotation for Mendelian Disorders in the Era of Advanced Sequencing Technologies.
Chakravorty S; Hegde M
Annu Rev Genomics Hum Genet; 2017 Aug; 18():229-256. PubMed ID: 28415856
[TBL] [Abstract][Full Text] [Related]
17. wKGGSeq: A Comprehensive Strategy-Based and Disease-Targeted Online Framework to Facilitate Exome Sequencing Studies of Inherited Disorders.
Li MJ; Deng J; Wang P; Yang W; Ho SL; Sham PC; Wang J; Li M
Hum Mutat; 2015 May; 36(5):496-503. PubMed ID: 25676918
[TBL] [Abstract][Full Text] [Related]
18. DaMold: A data-mining platform for variant annotation and visualization in molecular diagnostics research.
Pandey RV; Pabinger S; Kriegner A; Weinhäusel A
Hum Mutat; 2017 Jul; 38(7):778-787. PubMed ID: 28397319
[TBL] [Abstract][Full Text] [Related]
19. SG-ADVISER mtDNA: a web server for mitochondrial DNA annotation with data from 200 samples of a healthy aging cohort.
Rueda M; Torkamani A
BMC Bioinformatics; 2017 Aug; 18(1):373. PubMed ID: 28821228
[TBL] [Abstract][Full Text] [Related]
20. Seshat: A Web service for accurate annotation, validation, and analysis of TP53 variants generated by conventional and next-generation sequencing.
Tikkanen T; Leroy B; Fournier JL; Risques RA; Malcikova J; Soussi T
Hum Mutat; 2018 Jul; 39(7):925-933. PubMed ID: 29696732
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
