632 related articles for article (PubMed ID: 28725217)
1. Metagenomics: The Next Culture-Independent Game Changer.
Forbes JD; Knox NC; Ronholm J; Pagotto F; Reimer A
Front Microbiol; 2017; 8():1069. PubMed ID: 28725217
[TBL] [Abstract][Full Text] [Related]
2. Clinical Microbiology Laboratories' Adoption of Culture-Independent Diagnostic Tests Is a Threat to Foodborne-Disease Surveillance in the United States.
Shea S; Kubota KA; Maguire H; Gladbach S; Woron A; Atkinson-Dunn R; Couturier MR; Miller MB
J Clin Microbiol; 2017 Jan; 55(1):10-19. PubMed ID: 27795338
[TBL] [Abstract][Full Text] [Related]
3. Metagenomic Approaches for Public Health Surveillance of Foodborne Infections: Opportunities and Challenges.
Carleton HA; Besser J; Williams-Newkirk AJ; Huang A; Trees E; Gerner-Smidt P
Foodborne Pathog Dis; 2019 Jul; 16(7):474-479. PubMed ID: 31170005
[TBL] [Abstract][Full Text] [Related]
4. Incidence and Trends of Infections with Pathogens Transmitted Commonly Through Food and the Effect of Increasing Use of Culture-Independent Diagnostic Tests on Surveillance - Foodborne Diseases Active Surveillance Network, 10 U.S. Sites, 2013-2016.
Marder EP; Cieslak PR; Cronquist AB; Dunn J; Lathrop S; Rabatsky-Ehr T; Ryan P; Smith K; Tobin-D'Angelo M; Vugia DJ; Zansky S; Holt KG; Wolpert BJ; Lynch M; Tauxe R; Geissler AL
MMWR Morb Mortal Wkly Rep; 2017 Apr; 66(15):397-403. PubMed ID: 28426643
[TBL] [Abstract][Full Text] [Related]
5. Changing Diagnostic Testing Practices for Foodborne Pathogens, Foodborne Diseases Active Surveillance Network, 2012-2019.
Ray LC; Griffin PM; Wymore K; Wilson E; Hurd S; LaClair B; Wozny S; Eikmeier D; Nicholson C; Burzlaff K; Hatch J; Fankhauser M; Kubota K; Huang JY; Geissler A; Payne DC; Tack DM
Open Forum Infect Dis; 2022 Aug; 9(8):ofac344. PubMed ID: 35928506
[TBL] [Abstract][Full Text] [Related]
6. Metagenomics Approaches for Improving Food Safety: A Review.
Billington C; Kingsbury JM; Rivas L
J Food Prot; 2022 Mar; 85(3):448-464. PubMed ID: 34706052
[TBL] [Abstract][Full Text] [Related]
7. Highlighting Clinical Metagenomics for Enhanced Diagnostic Decision-making: A Step Towards Wider Implementation.
Forbes JD; Knox NC; Peterson CL; Reimer AR
Comput Struct Biotechnol J; 2018; 16():108-120. PubMed ID: 30026887
[TBL] [Abstract][Full Text] [Related]
8. The Present and Future of Whole Genome Sequencing (WGS) and Whole Metagenome Sequencing (WMS) for Surveillance of Antimicrobial Resistant Microorganisms and Antimicrobial Resistance Genes across the Food Chain.
Oniciuc EA; Likotrafiti E; Alvarez-Molina A; Prieto M; Santos JA; Alvarez-Ordóñez A
Genes (Basel); 2018 May; 9(5):. PubMed ID: 29789467
[TBL] [Abstract][Full Text] [Related]
9. Metagenomics of Two Severe Foodborne Outbreaks Provides Diagnostic Signatures and Signs of Coinfection Not Attainable by Traditional Methods.
Huang AD; Luo C; Pena-Gonzalez A; Weigand MR; Tarr CL; Konstantinidis KT
Appl Environ Microbiol; 2017 Feb; 83(3):. PubMed ID: 27881416
[TBL] [Abstract][Full Text] [Related]
10. Clinical Metagenomics Is Increasingly Accurate and Affordable to Detect Enteric Bacterial Pathogens in Stool.
Peterson CL; Alexander D; Chen JC; Adam H; Walker M; Ali J; Forbes J; Taboada E; Barker DOR; Graham M; Knox N; Reimer AR
Microorganisms; 2022 Feb; 10(2):. PubMed ID: 35208895
[TBL] [Abstract][Full Text] [Related]
11. From the Pipeline to the Bedside: Advances and Challenges in Clinical Metagenomics.
Dulanto Chiang A; Dekker JP
J Infect Dis; 2020 Mar; 221(Suppl 3):S331-S340. PubMed ID: 31538184
[TBL] [Abstract][Full Text] [Related]
12. GalaxyTrakr: a distributed analysis tool for public health whole genome sequence data accessible to non-bioinformaticians.
Gangiredla J; Rand H; Benisatto D; Payne J; Strittmatter C; Sanders J; Wolfgang WJ; Libuit K; Herrick JB; Prarat M; Toro M; Farrell T; Strain E
BMC Genomics; 2021 Feb; 22(1):114. PubMed ID: 33568057
[TBL] [Abstract][Full Text] [Related]
13. Metagenomics for pathogen detection in public health.
Miller RR; Montoya V; Gardy JL; Patrick DM; Tang P
Genome Med; 2013; 5(9):81. PubMed ID: 24050114
[TBL] [Abstract][Full Text] [Related]
14. A metagenomics-based workflow for the detection and genomic characterization of GBS in raw freshwater fish.
Sim KH; Ho J; Lim JQ; Chan SH; Li A; Chng KR
Microbiol Spectr; 2024 Jun; 12(6):e0327623. PubMed ID: 38712931
[TBL] [Abstract][Full Text] [Related]
15. Next Generation and Other Sequencing Technologies in Diagnostic Microbiology and Infectious Diseases.
Hilt EE; Ferrieri P
Genes (Basel); 2022 Aug; 13(9):. PubMed ID: 36140733
[TBL] [Abstract][Full Text] [Related]
16. Evaluation of whole-genome sequencing for outbreak detection of Verotoxigenic Escherichia coli O157:H7 from the Canadian perspective.
Rumore J; Tschetter L; Kearney A; Kandar R; McCormick R; Walker M; Peterson CL; Reimer A; Nadon C
BMC Genomics; 2018 Dec; 19(1):870. PubMed ID: 30514209
[TBL] [Abstract][Full Text] [Related]
17. Genomic Epidemiology: Whole-Genome-Sequencing-Powered Surveillance and Outbreak Investigation of Foodborne Bacterial Pathogens.
Deng X; den Bakker HC; Hendriksen RS
Annu Rev Food Sci Technol; 2016; 7():353-74. PubMed ID: 26772415
[TBL] [Abstract][Full Text] [Related]
18. Novel opportunities for NGS-based one health surveillance of foodborne viruses.
Desdouits M; de Graaf M; Strubbia S; Oude Munnink BB; Kroneman A; Le Guyader FS; Koopmans MPG
One Health Outlook; 2020; 2():14. PubMed ID: 33829135
[TBL] [Abstract][Full Text] [Related]
19. Future potential of metagenomics in microbiology laboratories.
Schuele L; Cassidy H; Peker N; Rossen JWA; Couto N
Expert Rev Mol Diagn; 2021 Dec; 21(12):1273-1285. PubMed ID: 34755585
[TBL] [Abstract][Full Text] [Related]
20. Next Generation Sequencing and Bioinformatics Methodologies for Infectious Disease Research and Public Health: Approaches, Applications, and Considerations for Development of Laboratory Capacity.
Maljkovic Berry I; Melendrez MC; Bishop-Lilly KA; Rutvisuttinunt W; Pollett S; Talundzic E; Morton L; Jarman RG
J Infect Dis; 2020 Mar; 221(Suppl 3):S292-S307. PubMed ID: 31612214
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]