388 related articles for article (PubMed ID: 28728523)
1. Structural insights into the binding of small ligand molecules to a G-quadruplex DNA located in the HIV-1 promoter.
Mitrasinovic PM
J Biomol Struct Dyn; 2018 Jul; 36(9):2292-2302. PubMed ID: 28728523
[TBL] [Abstract][Full Text] [Related]
2. Sequence-dependent binding of flavonoids to duplex DNA.
Mitrasinovic PM
J Chem Inf Model; 2015 Feb; 55(2):421-33. PubMed ID: 25580618
[TBL] [Abstract][Full Text] [Related]
3. Topology of a DNA G-quadruplex structure formed in the HIV-1 promoter: a potential target for anti-HIV drug development.
Amrane S; Kerkour A; Bedrat A; Vialet B; Andreola ML; Mergny JL
J Am Chem Soc; 2014 Apr; 136(14):5249-52. PubMed ID: 24649937
[TBL] [Abstract][Full Text] [Related]
4. Exploiting hydrogen bonding interactions to probe smaller linear and cyclic diamines binding to G-quadruplexes: a DFT and molecular dynamics study.
Kanti Si M; Sen A; Ganguly B
Phys Chem Chem Phys; 2017 May; 19(18):11474-11484. PubMed ID: 28425525
[TBL] [Abstract][Full Text] [Related]
5. Ligand-induced conformational preorganization of loops of c-MYC G-quadruplex DNA and its implications in structure-specific drug design.
Harikrishna S; Kotaru S; Pradeepkumar PI
Mol Biosyst; 2017 Jul; 13(8):1458-1468. PubMed ID: 28650023
[TBL] [Abstract][Full Text] [Related]
6. G-quadruplex ligands targeting telomeres do not inhibit HIV promoter activity and cooperate with latency reversing agents in killing latently infected cells.
Piekna-Przybylska D; Bambara RA; Maggirwar SB; Dewhurst S
Cell Cycle; 2020 Sep; 19(18):2298-2313. PubMed ID: 32807015
[TBL] [Abstract][Full Text] [Related]
7. Ligand binding to telomeric G-quadruplex DNA investigated by funnel-metadynamics simulations.
Moraca F; Amato J; Ortuso F; Artese A; Pagano B; Novellino E; Alcaro S; Parrinello M; Limongelli V
Proc Natl Acad Sci U S A; 2017 Mar; 114(11):E2136-E2145. PubMed ID: 28232513
[TBL] [Abstract][Full Text] [Related]
8. Molecular dynamics simulations reveal the balance of forces governing the formation of a guanine tetrad-a common structural unit of G-quadruplex DNA.
Kogut M; Kleist C; Czub J
Nucleic Acids Res; 2016 Apr; 44(7):3020-30. PubMed ID: 26980278
[TBL] [Abstract][Full Text] [Related]
9. [Determination of the binding of natural products to the human c-myb oncogene promoter G-quadruplex DNA by capillary electrophoresis and electrospray ionization mass spectrometry].
Wang S; Yang Y; Fan S; Li H; David DYC
Se Pu; 2020 Sep; 38(9):1069-1077. PubMed ID: 34213273
[TBL] [Abstract][Full Text] [Related]
10. Template-assembled synthetic G-quadruplex (TASQ): a useful system for investigating the interactions of ligands with constrained quadruplex topologies.
Murat P; Bonnet R; Van der Heyden A; Spinelli N; Labbé P; Monchaud D; Teulade-Fichou MP; Dumy P; Defrancq E
Chemistry; 2010 May; 16(20):6106-14. PubMed ID: 20397247
[TBL] [Abstract][Full Text] [Related]
11. Targeting human telomeric DNA quadruplex with novel berberrubine derivatives: insights from spectroscopic and docking studies.
Saha U; Yasmeen Khan A; Bhuiya S; Das S; Fiorillo G; Lombardi P; Suresh Kumar G
J Biomol Struct Dyn; 2019 Apr; 37(6):1375-1389. PubMed ID: 29607778
[TBL] [Abstract][Full Text] [Related]
12. Dispersed dynamics of solvation in G-quadruplex DNA: comparison of dynamic Stokes shifts of probes in parallel and antiparallel quadruplex structures.
Singh MK; Shweta H; Sen S
Methods Appl Fluoresc; 2016 Sep; 4(3):034009. PubMed ID: 28355155
[TBL] [Abstract][Full Text] [Related]
13. Cationic red emitting fluorophore: A light up NIR fluorescent probe for G4-DNA.
Kumari B; Yadav A; Pany SP; Pradeepkumar PI; Kanvah S
J Photochem Photobiol B; 2019 Jan; 190():128-136. PubMed ID: 30529810
[TBL] [Abstract][Full Text] [Related]
14. Ligand Selectivity in the Recognition of Protoberberine Alkaloids by Hybrid-2 Human Telomeric G-Quadruplex: Binding Free Energy Calculation, Fluorescence Binding, and NMR Experiments.
Deng N; Xia J; Wickstrom L; Lin C; Wang K; He P; Yin Y; Yang D
Molecules; 2019 Apr; 24(8):. PubMed ID: 31010072
[TBL] [Abstract][Full Text] [Related]
15. Novel G-quadruplex stabilizing agents: in-silico approach and dynamics.
Kar RK; Suryadevara P; Jana J; Bhunia A; Chatterjee S
J Biomol Struct Dyn; 2013 Dec; 31(12):1497-518. PubMed ID: 23244447
[TBL] [Abstract][Full Text] [Related]
16. Flexible Versus Rigid G-Quadruplex DNA Ligands: Synthesis of Two Series of Bis-indole Derivatives and Comparison of Their Interactions with G-Quadruplex DNA.
Prasad B; Jamroskovic J; Bhowmik S; Kumar R; Romell T; Sabouri N; Chorell E
Chemistry; 2018 Jun; 24(31):7926-7938. PubMed ID: 29603472
[TBL] [Abstract][Full Text] [Related]
17. Tandem application of ligand-based virtual screening and G4-OAS assay to identify novel G-quadruplex-targeting chemotypes.
Musumeci D; Amato J; Zizza P; Platella C; Cosconati S; Cingolani C; Biroccio A; Novellino E; Randazzo A; Giancola C; Pagano B; Montesarchio D
Biochim Biophys Acta Gen Subj; 2017 May; 1861(5 Pt B):1341-1352. PubMed ID: 28130159
[TBL] [Abstract][Full Text] [Related]
18. Prediction of Hit-to-Lead Ligand Molecule Interaction with G-Quadruplex DNA from c-Myc Oncogene Promoter Region.
Mitrasinovic PM
Acta Chim Slov; 2020 Jun; 67(2):386-395. PubMed ID: 33855563
[TBL] [Abstract][Full Text] [Related]
19. Structure of a DNA G-quadruplex that Modulates SP1 Binding Sites Architecture in HIV-1 Promoter.
De Rache A; Marquevielle J; Bouaziz S; Vialet B; Andreola ML; Mergny JL; Amrane S
J Mol Biol; 2024 Jan; 436(2):168359. PubMed ID: 37952768
[TBL] [Abstract][Full Text] [Related]
20. Probing GFP Chromophore Analogs as Anti-HIV Agents Targeting LTR-III G-Quadruplex.
Ryazantsev DY; Myshkin MY; Alferova VA; Tsvetkov VB; Shustova EY; Kamzeeva PN; Kovalets PV; Zaitseva ER; Baleeva NS; Zatsepin TS; Shenkarev ZO; Baranov MS; Kozlovskaya LI; Aralov AV
Biomolecules; 2021 Sep; 11(10):. PubMed ID: 34680042
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
