BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

213 related articles for article (PubMed ID: 28730497)

  • 1. Databases and Computational Tools for Evolutionary Analysis of Protein Phosphorylation.
    Tan CSH
    Methods Mol Biol; 2017; 1636():475-484. PubMed ID: 28730497
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A Systematic Bioinformatics Approach to Identify High Quality Mass Spectrometry Data and Functionally Annotate Proteins and Proteomes.
    Islam MT; Mohamedali A; Ahn SB; Nawar I; Baker MS; Ranganathan S
    Methods Mol Biol; 2017; 1549():163-176. PubMed ID: 27975291
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Resources for Assignment of Phosphorylation Sites on Peptides and Proteins.
    Ravikumar V; Macek B; Mijakovic I
    Methods Mol Biol; 2016; 1355():293-306. PubMed ID: 26584934
    [TBL] [Abstract][Full Text] [Related]  

  • 4. ProteoConnections: a bioinformatics platform to facilitate proteome and phosphoproteome analyses.
    Courcelles M; Lemieux S; Voisin L; Meloche S; Thibault P
    Proteomics; 2011 Jul; 11(13):2654-71. PubMed ID: 21630457
    [TBL] [Abstract][Full Text] [Related]  

  • 5. An Introduction to Proteome Bioinformatics.
    Keerthikumar S
    Methods Mol Biol; 2017; 1549():1-3. PubMed ID: 27975279
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Bioinformatics Methods to Deduce Biological Interpretation from Proteomics Data.
    Patel K; Singh M; Gowda H
    Methods Mol Biol; 2017; 1549():147-161. PubMed ID: 27975290
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Analysis of mass spectrometry data in proteomics.
    Matthiesen R; Jensen ON
    Methods Mol Biol; 2008; 453():105-22. PubMed ID: 18712299
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Platforms and Pipelines for Proteomics Data Analysis and Management.
    Codrea MC; Nahnsen S
    Adv Exp Med Biol; 2016; 919():203-215. PubMed ID: 27975218
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Identification, Quantification, and Site Localization of Protein Posttranslational Modifications via Mass Spectrometry-Based Proteomics.
    Ke M; Shen H; Wang L; Luo S; Lin L; Yang J; Tian R
    Adv Exp Med Biol; 2016; 919():345-382. PubMed ID: 27975226
    [TBL] [Abstract][Full Text] [Related]  

  • 10. VEMS 3.0: algorithms and computational tools for tandem mass spectrometry based identification of post-translational modifications in proteins.
    Matthiesen R; Trelle MB; Højrup P; Bunkenborg J; Jensen ON
    J Proteome Res; 2005; 4(6):2338-47. PubMed ID: 16335983
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Useful Web Resources.
    Bui A; Person MD
    Adv Exp Med Biol; 2016; 919():249-253. PubMed ID: 27975223
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Cross-Species PTM Mapping from Phosphoproteomic Data.
    Chaudhuri R; Yang JY
    Methods Mol Biol; 2017; 1558():459-469. PubMed ID: 28150252
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Global quantitative proteomics using spectral counting: an inexpensive experimental and bioinformatics workflow for deep proteome coverage.
    Balbuena TS; Demartini DR; Thelen JJ
    Methods Mol Biol; 2014; 1072():171-83. PubMed ID: 24136522
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Proteotypic Peptides and Their Applications.
    Keerthikumar S; Mathivanan S
    Methods Mol Biol; 2017; 1549():101-107. PubMed ID: 27975286
    [TBL] [Abstract][Full Text] [Related]  

  • 15. In-depth analysis of protein inference algorithms using multiple search engines and well-defined metrics.
    Audain E; Uszkoreit J; Sachsenberg T; Pfeuffer J; Liang X; Hermjakob H; Sanchez A; Eisenacher M; Reinert K; Tabb DL; Kohlbacher O; Perez-Riverol Y
    J Proteomics; 2017 Jan; 150():170-182. PubMed ID: 27498275
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Proteogenomics from a bioinformatics angle: A growing field.
    Menschaert G; Fenyö D
    Mass Spectrom Rev; 2017 Sep; 36(5):584-599. PubMed ID: 26670565
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Comparative phosphoproteomics reveals evolutionary and functional conservation of phosphorylation across eukaryotes.
    Boekhorst J; van Breukelen B; Heck A; Snel B
    Genome Biol; 2008 Oct; 9(10):R144. PubMed ID: 18828897
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The ConSurf-HSSP database: the mapping of evolutionary conservation among homologs onto PDB structures.
    Glaser F; Rosenberg Y; Kessel A; Pupko T; Ben-Tal N
    Proteins; 2005 Feb; 58(3):610-7. PubMed ID: 15614759
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Unassigned MS/MS Spectra: Who Am I?
    Pathan M; Samuel M; Keerthikumar S; Mathivanan S
    Methods Mol Biol; 2017; 1549():67-74. PubMed ID: 27975284
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A Simple Workflow for Large Scale Shotgun Glycoproteomics.
    Guldbrandsen A; Barsnes H; Kroksveen AC; Berven FS; Vaudel M
    Methods Mol Biol; 2016; 1394():275-286. PubMed ID: 26700056
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.