BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

120 related articles for article (PubMed ID: 28736575)

  • 1. Identification of bifurcation transitions in biological regulatory networks using Answer-Set Programming.
    Fitime LF; Roux O; Guziolowski C; Paulevé L
    Algorithms Mol Biol; 2017; 12():19. PubMed ID: 28736575
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Reduction of Qualitative Models of Biological Networks for Transient Dynamics Analysis.
    Pauleve L
    IEEE/ACM Trans Comput Biol Bioinform; 2018; 15(4):1167-1179. PubMed ID: 28885158
    [TBL] [Abstract][Full Text] [Related]  

  • 3. ASP-based method for the enumeration of attractors in non-deterministic synchronous and asynchronous multi-valued networks.
    Ben Abdallah E; Folschette M; Roux O; Magnin M
    Algorithms Mol Biol; 2017; 12():20. PubMed ID: 28814968
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Estimating Attractor Reachability in Asynchronous Logical Models.
    Mendes ND; Henriques R; Remy E; Carneiro J; Monteiro PT; Chaouiya C
    Front Physiol; 2018; 9():1161. PubMed ID: 30245634
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Boolean regulatory network reconstruction using literature based knowledge with a genetic algorithm optimization method.
    Dorier J; Crespo I; Niknejad A; Liechti R; Ebeling M; Xenarios I
    BMC Bioinformatics; 2016 Oct; 17(1):410. PubMed ID: 27716031
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Exploring attractor bifurcations in Boolean networks.
    Beneš N; Brim L; Kadlecaj J; Pastva S; Šafránek D
    BMC Bioinformatics; 2022 May; 23(1):173. PubMed ID: 35546394
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Pinning Controller Design for Set Reachability of State-Dependent Impulsive Boolean Networks.
    Li Y; Feng JE; Li X; Xu S
    IEEE Trans Neural Netw Learn Syst; 2023 Dec; 34(12):10838-10850. PubMed ID: 35536802
    [TBL] [Abstract][Full Text] [Related]  

  • 8. An FVS-Based Approach to Attractor Detection in Asynchronous Random Boolean Networks.
    Van Giang T; Akutsu T; Hiraishi K
    IEEE/ACM Trans Comput Biol Bioinform; 2022; 19(2):806-818. PubMed ID: 33017287
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Qualitative dynamics semantics for SBGN process description.
    Rougny A; Froidevaux C; Calzone L; Paulevé L
    BMC Syst Biol; 2016 Jun; 10(1):42. PubMed ID: 27306057
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Repairing Boolean logical models from time-series data using Answer Set Programming.
    Lemos A; Lynce I; Monteiro PT
    Algorithms Mol Biol; 2019; 14():9. PubMed ID: 30962813
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Modelling gene and protein regulatory networks with answer set programming.
    Fayruzov T; Janssen J; Vermeir D; Cornelis C; De Cock M
    Int J Data Min Bioinform; 2011; 5(2):209-29. PubMed ID: 21544955
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A Semiquantitative Framework for Gene Regulatory Networks: Increasing the Time and Quantitative Resolution of Boolean Networks.
    Kerkhofs J; Geris L
    PLoS One; 2015; 10(6):e0130033. PubMed ID: 26067297
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Approximating Attractors of Boolean Networks by Iterative CTL Model Checking.
    Klarner H; Siebert H
    Front Bioeng Biotechnol; 2015; 3():130. PubMed ID: 26442247
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Symbolic reachable set computation of piecewise affine hybrid automata and its application to biological modelling: Delta-Notch protein signalling.
    Ghosh R; Tomlin C
    Syst Biol (Stevenage); 2004 Jun; 1(1):170-83. PubMed ID: 17052127
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Boolean network identification from perturbation time series data combining dynamics abstraction and logic programming.
    Ostrowski M; Paulevé L; Schaub T; Siegel A; Guziolowski C
    Biosystems; 2016 Nov; 149():139-153. PubMed ID: 27484338
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Rhythmic and non-rhythmic attractors in asynchronous random Boolean networks.
    Di Paolo EA
    Biosystems; 2001 Mar; 59(3):185-95. PubMed ID: 11311467
    [TBL] [Abstract][Full Text] [Related]  

  • 17. An Efficient Steady-State Analysis Method for Large Boolean Networks with High Maximum Node Connectivity.
    Hong C; Hwang J; Cho KH; Shin I
    PLoS One; 2015; 10(12):e0145734. PubMed ID: 26716694
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A circuit-preserving mapping from multilevel to Boolean dynamics.
    Fauré A; Kaji S
    J Theor Biol; 2018 Mar; 440():71-79. PubMed ID: 29277602
    [TBL] [Abstract][Full Text] [Related]  

  • 19. State feedback control design for Boolean networks.
    Liu R; Qian C; Liu S; Jin YF
    BMC Syst Biol; 2016 Aug; 10 Suppl 3(Suppl 3):70. PubMed ID: 27586140
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Griffin: A Tool for Symbolic Inference of Synchronous Boolean Molecular Networks.
    Muñoz S; Carrillo M; Azpeitia E; Rosenblueth DA
    Front Genet; 2018; 9():39. PubMed ID: 29559993
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.