These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

1046 related articles for article (PubMed ID: 28787424)

  • 1. Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.
    Bowers RM; Kyrpides NC; Stepanauskas R; Harmon-Smith M; Doud D; Reddy TBK; Schulz F; Jarett J; Rivers AR; Eloe-Fadrosh EA; Tringe SG; Ivanova NN; Copeland A; Clum A; Becraft ED; Malmstrom RR; Birren B; Podar M; Bork P; Weinstock GM; Garrity GM; Dodsworth JA; Yooseph S; Sutton G; Glöckner FO; Gilbert JA; Nelson WC; Hallam SJ; Jungbluth SP; Ettema TJG; Tighe S; Konstantinidis KT; Liu WT; Baker BJ; Rattei T; Eisen JA; Hedlund B; McMahon KD; Fierer N; Knight R; Finn R; Cochrane G; Karsch-Mizrachi I; Tyson GW; Rinke C; ; Lapidus A; Meyer F; Yilmaz P; Parks DH; Eren AM; Schriml L; Banfield JF; Hugenholtz P; Woyke T
    Nat Biotechnol; 2017 Aug; 35(8):725-731. PubMed ID: 28787424
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Minimum Information about an Uncultivated Virus Genome (MIUViG).
    Roux S; Adriaenssens EM; Dutilh BE; Koonin EV; Kropinski AM; Krupovic M; Kuhn JH; Lavigne R; Brister JR; Varsani A; Amid C; Aziz RK; Bordenstein SR; Bork P; Breitbart M; Cochrane GR; Daly RA; Desnues C; Duhaime MB; Emerson JB; Enault F; Fuhrman JA; Hingamp P; Hugenholtz P; Hurwitz BL; Ivanova NN; Labonté JM; Lee KB; Malmstrom RR; Martinez-Garcia M; Mizrachi IK; Ogata H; Páez-Espino D; Petit MA; Putonti C; Rattei T; Reyes A; Rodriguez-Valera F; Rosario K; Schriml L; Schulz F; Steward GF; Sullivan MB; Sunagawa S; Suttle CA; Temperton B; Tringe SG; Thurber RV; Webster NS; Whiteson KL; Wilhelm SW; Wommack KE; Woyke T; Wrighton KC; Yilmaz P; Yoshida T; Young MJ; Yutin N; Allen LZ; Kyrpides NC; Eloe-Fadrosh EA
    Nat Biotechnol; 2019 Jan; 37(1):29-37. PubMed ID: 30556814
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A Practical Approach to Using the Genomic Standards Consortium MIxS Reporting Standard for Comparative Genomics and Metagenomics.
    Eloe-Fadrosh EA; Mungall CJ; Miller MA; Smith M; Patil SS; Kelliher JM; Johnson LYD; Rodriguez FE; Chain PSG; Hu B; Thornton MB; McCue LA; McHardy AC; Harris NL; Reddy TBK; Mukherjee S; Hunter CI; Walls R; Schriml LM
    Methods Mol Biol; 2024; 2802():587-609. PubMed ID: 38819573
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications.
    Yilmaz P; Kottmann R; Field D; Knight R; Cole JR; Amaral-Zettler L; Gilbert JA; Karsch-Mizrachi I; Johnston A; Cochrane G; Vaughan R; Hunter C; Park J; Morrison N; Rocca-Serra P; Sterk P; Arumugam M; Bailey M; Baumgartner L; Birren BW; Blaser MJ; Bonazzi V; Booth T; Bork P; Bushman FD; Buttigieg PL; Chain PS; Charlson E; Costello EK; Huot-Creasy H; Dawyndt P; DeSantis T; Fierer N; Fuhrman JA; Gallery RE; Gevers D; Gibbs RA; San Gil I; Gonzalez A; Gordon JI; Guralnick R; Hankeln W; Highlander S; Hugenholtz P; Jansson J; Kau AL; Kelley ST; Kennedy J; Knights D; Koren O; Kuczynski J; Kyrpides N; Larsen R; Lauber CL; Legg T; Ley RE; Lozupone CA; Ludwig W; Lyons D; Maguire E; Methé BA; Meyer F; Muegge B; Nakielny S; Nelson KE; Nemergut D; Neufeld JD; Newbold LK; Oliver AE; Pace NR; Palanisamy G; Peplies J; Petrosino J; Proctor L; Pruesse E; Quast C; Raes J; Ratnasingham S; Ravel J; Relman DA; Assunta-Sansone S; Schloss PD; Schriml L; Sinha R; Smith MI; Sodergren E; Spo A; Stombaugh J; Tiedje JM; Ward DV; Weinstock GM; Wendel D; White O; Whiteley A; Wilke A; Wortman JR; Yatsunenko T; Glöckner FO
    Nat Biotechnol; 2011 May; 29(5):415-20. PubMed ID: 21552244
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Evaluating
    Vosloo S; Huo L; Anderson CL; Dai Z; Sevillano M; Pinto A
    Microbiol Spectr; 2021 Dec; 9(3):e0143421. PubMed ID: 34730411
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.
    Bowers RM; Kyrpides NC; Stepanauskas R; Harmon-Smith M; Doud D; Reddy TBK; Schulz F; Jarett J; Rivers AR; Eloe-Fadrosh EA; Tringe SG; Ivanova NN; Copeland A; Clum A; Becraft ED; Malmstrom RR; Birren B; Podar M; Bork P; Weinstock GM; Garrity GM; Dodsworth JA; Yooseph S; Sutton G; Glöckner FO; Gilbert JA; Nelson WC; Hallam SJ; Jungbluth SP; Ettema TJG; Tighe S; Konstantinidis KT; Liu WT; Baker BJ; Rattei T; Eisen JA; Hedlund B; McMahon KD; Fierer N; Knight R; Finn R; Cochrane G; Karsch-Mizrachi I; Tyson GW; Rinke C; ; Lapidus A; Meyer F; Yilmaz P; Parks DH; Eren AM; Schriml L; Banfield JF; Hugenholtz P; Woyke T
    Nat Biotechnol; 2018 Jul; 36(7):660. PubMed ID: 29979671
    [No Abstract]   [Full Text] [Related]  

  • 7. Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.
    Bowers RM; Kyrpides NC; Stepanauskas R; Harmon-Smith M; Doud D; Reddy TBK; Schulz F; Jarett J; Rivers AR; Eloe-Fadrosh EA; Tringe SG; Ivanova NN; Copeland A; Clum A; Becraft ED; Malmstrom RR; Birren B; Podar M; Bork P; Weinstock GM; Garrity GM; Dodsworth JA; Yooseph S; Sutton G; Glöckner FO; Gilbert JA; Nelson WC; Hallam SJ; Jungbluth SP; Ettema TJG; Tighe S; Konstantinidis KT; Liu WT; Baker BJ; Rattei T; Eisen JA; Hedlund B; McMahon KD; Fierer N; Knight R; Finn R; Cochrane G; Karsch-Mizrachi I; Tyson GW; Rinke C; ; Lapidus A; Meyer F; Yilmaz P; Parks DH; Eren AM; Schriml L; Banfield JF; Hugenholtz P; Woyke T
    Nat Biotechnol; 2018 Feb; 36(2):196. PubMed ID: 29406516
    [No Abstract]   [Full Text] [Related]  

  • 8. Large-scale quality assessment of prokaryotic genomes with metashot/prok-quality.
    Albanese D; Donati C
    F1000Res; 2021; 10():822. PubMed ID: 35136576
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life.
    Parks DH; Rinke C; Chuvochina M; Chaumeil PA; Woodcroft BJ; Evans PN; Hugenholtz P; Tyson GW
    Nat Microbiol; 2017 Nov; 2(11):1533-1542. PubMed ID: 28894102
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Flexible genomic islands as drivers of genome evolution.
    Rodriguez-Valera F; Martin-Cuadrado AB; López-Pérez M
    Curr Opin Microbiol; 2016 Jun; 31():154-160. PubMed ID: 27085300
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Compendium of 4,941 rumen metagenome-assembled genomes for rumen microbiome biology and enzyme discovery.
    Stewart RD; Auffret MD; Warr A; Walker AW; Roehe R; Watson M
    Nat Biotechnol; 2019 Aug; 37(8):953-961. PubMed ID: 31375809
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Ecosystem-wide metagenomic binning enables prediction of ecological niches from genomes.
    Alneberg J; Bennke C; Beier S; Bunse C; Quince C; Ininbergs K; Riemann L; Ekman M; Jürgens K; Labrenz M; Pinhassi J; Andersson AF
    Commun Biol; 2020 Mar; 3(1):119. PubMed ID: 32170201
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Adding genomic 'foliage' to the tree of life.
    Walker A
    Nat Rev Microbiol; 2014 Feb; 12(2):78. PubMed ID: 24429416
    [No Abstract]   [Full Text] [Related]  

  • 14. Anomalous Phylogenetic Behavior of Ribosomal Proteins in Metagenome-Assembled Asgard Archaea.
    Garg SG; Kapust N; Lin W; Knopp M; Tria FDK; Nelson-Sathi S; Gould SB; Fan L; Zhu R; Zhang C; Martin WF
    Genome Biol Evol; 2021 Jan; 13(1):. PubMed ID: 33462601
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Microbial taxonomy in the era of OMICS: application of DNA sequences, computational tools and techniques.
    Mahato NK; Gupta V; Singh P; Kumari R; Verma H; Tripathi C; Rani P; Sharma A; Singhvi N; Sood U; Hira P; Kohli P; Nayyar N; Puri A; Bajaj A; Kumar R; Negi V; Talwar C; Khurana H; Nagar S; Sharma M; Mishra H; Singh AK; Dhingra G; Negi RK; Shakarad M; Singh Y; Lal R
    Antonie Van Leeuwenhoek; 2017 Oct; 110(10):1357-1371. PubMed ID: 28831610
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Insights into the phylogeny and coding potential of microbial dark matter.
    Rinke C; Schwientek P; Sczyrba A; Ivanova NN; Anderson IJ; Cheng JF; Darling A; Malfatti S; Swan BK; Gies EA; Dodsworth JA; Hedlund BP; Tsiamis G; Sievert SM; Liu WT; Eisen JA; Hallam SJ; Kyrpides NC; Stepanauskas R; Rubin EM; Hugenholtz P; Woyke T
    Nature; 2013 Jul; 499(7459):431-7. PubMed ID: 23851394
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Comparative genomics reveals 104 candidate structured RNAs from bacteria, archaea, and their metagenomes.
    Weinberg Z; Wang JX; Bogue J; Yang J; Corbino K; Moy RH; Breaker RR
    Genome Biol; 2010; 11(3):R31. PubMed ID: 20230605
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Phylogenomic analysis of bacterial and archaeal sequences with AMPHORA2.
    Wu M; Scott AJ
    Bioinformatics; 2012 Apr; 28(7):1033-4. PubMed ID: 22332237
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Illuminating microbial diversity.
    Forster SC
    Nat Rev Microbiol; 2017 Oct; 15(10):578. PubMed ID: 28852214
    [No Abstract]   [Full Text] [Related]  

  • 20. Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains.
    Kyrpides NC; Hugenholtz P; Eisen JA; Woyke T; Göker M; Parker CT; Amann R; Beck BJ; Chain PS; Chun J; Colwell RR; Danchin A; Dawyndt P; Dedeurwaerdere T; DeLong EF; Detter JC; De Vos P; Donohue TJ; Dong XZ; Ehrlich DS; Fraser C; Gibbs R; Gilbert J; Gilna P; Glöckner FO; Jansson JK; Keasling JD; Knight R; Labeda D; Lapidus A; Lee JS; Li WJ; Ma J; Markowitz V; Moore ER; Morrison M; Meyer F; Nelson KE; Ohkuma M; Ouzounis CA; Pace N; Parkhill J; Qin N; Rossello-Mora R; Sikorski J; Smith D; Sogin M; Stevens R; Stingl U; Suzuki K; Taylor D; Tiedje JM; Tindall B; Wagner M; Weinstock G; Weissenbach J; White O; Wang J; Zhang L; Zhou YG; Field D; Whitman WB; Garrity GM; Klenk HP
    PLoS Biol; 2014 Aug; 12(8):e1001920. PubMed ID: 25093819
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 53.