497 related articles for article (PubMed ID: 28787426)
21. Global Mapping of Open Chromatin Regulatory Elements by Formaldehyde-Assisted Isolation of Regulatory Elements Followed by Sequencing (FAIRE-seq).
Bianco S; Rodrigue S; Murphy BD; Gévry N
Methods Mol Biol; 2015; 1334():261-72. PubMed ID: 26404156
[TBL] [Abstract][Full Text] [Related]
22. [Identification and mapping of cis-regulatory elements within long genomic sequences].
Akopov SB; Chernov IP; Vetchinova AS; Bulanenkova SS; Nikolaev LG
Mol Biol (Mosk); 2007; 41(5):787-92. PubMed ID: 18240562
[TBL] [Abstract][Full Text] [Related]
23. Understanding how cis-regulatory function is encoded in DNA sequence using massively parallel reporter assays and designed sequences.
White MA
Genomics; 2015 Sep; 106(3):165-170. PubMed ID: 26072432
[TBL] [Abstract][Full Text] [Related]
24. Pairs of Adjacent Conserved Noncoding Elements Separated by Conserved Genomic Distances Act as Cis-Regulatory Units.
Li L; Barth NKH; Hirth E; Taher L
Genome Biol Evol; 2018 Sep; 10(9):2535-2550. PubMed ID: 30184074
[TBL] [Abstract][Full Text] [Related]
25. Genes, mutations, and human inherited disease at the dawn of the age of personalized genomics.
Cooper DN; Chen JM; Ball EV; Howells K; Mort M; Phillips AD; Chuzhanova N; Krawczak M; Kehrer-Sawatzki H; Stenson PD
Hum Mutat; 2010 Jun; 31(6):631-55. PubMed ID: 20506564
[TBL] [Abstract][Full Text] [Related]
26. Identification of altered cis-regulatory elements in human disease.
Mathelier A; Shi W; Wasserman WW
Trends Genet; 2015 Feb; 31(2):67-76. PubMed ID: 25637093
[TBL] [Abstract][Full Text] [Related]
27. The identification of cis-regulatory elements: A review from a machine learning perspective.
Li Y; Chen CY; Kaye AM; Wasserman WW
Biosystems; 2015 Dec; 138():6-17. PubMed ID: 26499213
[TBL] [Abstract][Full Text] [Related]
28. Epigenetics, chromatin and genome organization: recent advances from the ENCODE project.
Siggens L; Ekwall K
J Intern Med; 2014 Sep; 276(3):201-14. PubMed ID: 24605849
[TBL] [Abstract][Full Text] [Related]
29. 3DSNP: a database for linking human noncoding SNPs to their three-dimensional interacting genes.
Lu Y; Quan C; Chen H; Bo X; Zhang C
Nucleic Acids Res; 2017 Jan; 45(D1):D643-D649. PubMed ID: 27789693
[TBL] [Abstract][Full Text] [Related]
30. OncoBase: a platform for decoding regulatory somatic mutations in human cancers.
Li X; Shi L; Wang Y; Zhong J; Zhao X; Teng H; Shi X; Yang H; Ruan S; Li M; Sun ZS; Zhan Q; Mao F
Nucleic Acids Res; 2019 Jan; 47(D1):D1044-D1055. PubMed ID: 30445567
[TBL] [Abstract][Full Text] [Related]
31. Mapping open chromatin with formaldehyde-assisted isolation of regulatory elements.
Nammo T; Rodríguez-Seguí SA; Ferrer J
Methods Mol Biol; 2011; 791():287-96. PubMed ID: 21913087
[TBL] [Abstract][Full Text] [Related]
32. The human noncoding genome defined by genetic diversity.
di Iulio J; Bartha I; Wong EHM; Yu HC; Lavrenko V; Yang D; Jung I; Hicks MA; Shah N; Kirkness EF; Fabani MM; Biggs WH; Ren B; Venter JC; Telenti A
Nat Genet; 2018 Mar; 50(3):333-337. PubMed ID: 29483654
[TBL] [Abstract][Full Text] [Related]
33. Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS).
Crawford GE; Holt IE; Whittle J; Webb BD; Tai D; Davis S; Margulies EH; Chen Y; Bernat JA; Ginsburg D; Zhou D; Luo S; Vasicek TJ; Daly MJ; Wolfsberg TG; Collins FS
Genome Res; 2006 Jan; 16(1):123-31. PubMed ID: 16344561
[TBL] [Abstract][Full Text] [Related]
34. Uncovering drug-responsive regulatory elements.
Luizon MR; Ahituv N
Pharmacogenomics; 2015 Nov; 16(16):1829-41. PubMed ID: 26555224
[TBL] [Abstract][Full Text] [Related]
35. Expanded encyclopaedias of DNA elements in the human and mouse genomes.
; Moore JE; Purcaro MJ; Pratt HE; Epstein CB; Shoresh N; Adrian J; Kawli T; Davis CA; Dobin A; Kaul R; Halow J; Van Nostrand EL; Freese P; Gorkin DU; Shen Y; He Y; Mackiewicz M; Pauli-Behn F; Williams BA; Mortazavi A; Keller CA; Zhang XO; Elhajjajy SI; Huey J; Dickel DE; Snetkova V; Wei X; Wang X; Rivera-Mulia JC; Rozowsky J; Zhang J; Chhetri SB; Zhang J; Victorsen A; White KP; Visel A; Yeo GW; Burge CB; Lécuyer E; Gilbert DM; Dekker J; Rinn J; Mendenhall EM; Ecker JR; Kellis M; Klein RJ; Noble WS; Kundaje A; Guigó R; Farnham PJ; Cherry JM; Myers RM; Ren B; Graveley BR; Gerstein MB; Pennacchio LA; Snyder MP; Bernstein BE; Wold B; Hardison RC; Gingeras TR; Stamatoyannopoulos JA; Weng Z
Nature; 2020 Jul; 583(7818):699-710. PubMed ID: 32728249
[TBL] [Abstract][Full Text] [Related]
36. Identifying co-opted transposable elements using comparative epigenomics.
Venuto D; Bourque G
Dev Growth Differ; 2018 Jan; 60(1):53-62. PubMed ID: 29363107
[TBL] [Abstract][Full Text] [Related]
37. Analysis of sequence conservation at nucleotide resolution.
Asthana S; Roytberg M; Stamatoyannopoulos J; Sunyaev S
PLoS Comput Biol; 2007 Dec; 3(12):e254. PubMed ID: 18166073
[TBL] [Abstract][Full Text] [Related]
38. Transposable Elements and DNA Methylation Create in Embryonic Stem Cells Human-Specific Regulatory Sequences Associated with Distal Enhancers and Noncoding RNAs.
Glinsky GV
Genome Biol Evol; 2015 May; 7(6):1432-54. PubMed ID: 25956794
[TBL] [Abstract][Full Text] [Related]
39. A compendium and comparative epigenomics analysis of cis-regulatory elements in the pig genome.
Zhao Y; Hou Y; Xu Y; Luan Y; Zhou H; Qi X; Hu M; Wang D; Wang Z; Fu Y; Li J; Zhang S; Chen J; Han J; Li X; Zhao S
Nat Commun; 2021 Apr; 12(1):2217. PubMed ID: 33850120
[TBL] [Abstract][Full Text] [Related]
40. Decoding the role of regulatory element polymorphisms in complex disease.
Vockley CM; Barrera A; Reddy TE
Curr Opin Genet Dev; 2017 Apr; 43():38-45. PubMed ID: 27984826
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
