97 related articles for article (PubMed ID: 28832117)
21. De novo design of buttressed loops for sculpting protein functions.
Jiang H; Jude KM; Wu K; Fallas J; Ueda G; Brunette TJ; Hicks DR; Pyles H; Yang A; Carter L; Lamb M; Li X; Levine PM; Stewart L; Garcia KC; Baker D
Nat Chem Biol; 2024 May; ():. PubMed ID: 38816644
[TBL] [Abstract][Full Text] [Related]
22. Analyzing the aromatic-aromatic interactions in proteins: A
Kumar YB; Kumar N; Vaikundamani S; Nagamani S; Mahanta HJ; Sastry GM; Sastry GN
Int J Biol Macromol; 2023 Dec; 253(Pt 5):127207. PubMed ID: 37797858
[TBL] [Abstract][Full Text] [Related]
23. High five! Methyl probes at five ring positions of phenylalanine explore the hydrophobic core dynamics of zinc finger miniproteins.
Horx P; Geyer A
Chem Sci; 2021 Sep; 12(34):11455-11463. PubMed ID: 34667551
[TBL] [Abstract][Full Text] [Related]
24. Biological noncovalent N/O⋯V interactions: insights from theory and protein data bank analyses.
Burguera S; Frontera A; Bauzá A
Phys Chem Chem Phys; 2023 Nov; 25(43):30040-30048. PubMed ID: 37905702
[TBL] [Abstract][Full Text] [Related]
25. The NCIWEB Server: A Novel Implementation of the Noncovalent Interactions Index for Biomolecular Systems.
Novoa T; Laplaza R; Peccati F; Fuster F; Contreras-García J
J Chem Inf Model; 2023 Aug; 63(15):4483-4489. PubMed ID: 37537899
[TBL] [Abstract][Full Text] [Related]
26. Design of High Affinity Binders to Convex Protein Target Sites.
Yang W; Hicks DR; Ghosh A; Schwartze TA; Conventry B; Goreshnik I; Allen A; Halabiya SF; Kim CJ; Hinck CS; Lee DS; Bera AK; Li Z; Wang Y; Schlichthaerle T; Cao L; Huang B; Garrett S; Gerben SR; Rettie S; Heine P; Murray A; Edman N; Carter L; Stewart L; Almo S; Hinck AP; Baker D
bioRxiv; 2024 May; ():. PubMed ID: 38746206
[TBL] [Abstract][Full Text] [Related]
27. En Route to Stabilized Compact Conformations of Single-Chain Polymeric Nanoparticles in Complex Media.
Wijker S; Deng L; Eisenreich F; Voets IK; Palmans ARA
Macromolecules; 2022 Jul; 55(14):6220-6230. PubMed ID: 35910311
[TBL] [Abstract][Full Text] [Related]
28. Lasso Proteins-Unifying Cysteine Knots and Miniproteins.
Greń BA; Dabrowski-Tumanski P; Niemyska W; Sulkowska JI
Polymers (Basel); 2021 Nov; 13(22):. PubMed ID: 34833285
[TBL] [Abstract][Full Text] [Related]
29. Blueprinting expandable nanomaterials with standardized protein building blocks.
Huddy TF; Hsia Y; Kibler RD; Xu J; Bethel N; Nagarajan D; Redler R; Leung PJY; Courbet A; Yang EC; Bera AK; Coudray N; Calise SJ; Davila-Hernandez FA; Weidle C; Han HL; Li Z; McHugh R; Reggiano G; Kang A; Sankaran B; Dickinson MS; Coventry B; Brunette TJ; Liu Y; Dauparas J; Borst AJ; Ekiert D; Kollman JM; Bhabha G; Baker D
bioRxiv; 2023 Jun; ():. PubMed ID: 37333359
[TBL] [Abstract][Full Text] [Related]
30. Neighborhood Preference of Amino Acids in Protein Structures and its Applications in Protein Structure Assessment.
Liu S; Xiang X; Gao X; Liu H
Sci Rep; 2020 Mar; 10(1):4371. PubMed ID: 32152349
[TBL] [Abstract][Full Text] [Related]
31. How do miniproteins fold?
Woolfson DN; Baker EG; Bartlett GJ
Science; 2017 Jul; 357(6347):133-134. PubMed ID: 28706028
[No Abstract] [Full Text] [Related]
32. PS-GO parametric protein search engine.
Mi Y; Marcu SB; Tabirca S; Yallapragada VVB
Comput Struct Biotechnol J; 2024 Dec; 23():1499-1509. PubMed ID: 38633387
[TBL] [Abstract][Full Text] [Related]
33. CrMP-Sol database: classification, bioinformatic analyses and comparison of cancer-related membrane proteins and their water-soluble variant designs.
Ma L; Zhang S; Liang Q; Huang W; Wang H; Pan E; Xu P; Zhang S; Tao F; Tang J; Qing R
BMC Bioinformatics; 2023 Sep; 24(1):360. PubMed ID: 37743473
[TBL] [Abstract][Full Text] [Related]
34. Massively parallel de novo protein design for targeted therapeutics.
Chevalier A; Silva DA; Rocklin GJ; Hicks DR; Vergara R; Murapa P; Bernard SM; Zhang L; Lam KH; Yao G; Bahl CD; Miyashita SI; Goreshnik I; Fuller JT; Koday MT; Jenkins CM; Colvin T; Carter L; Bohn A; Bryan CM; Fernández-Velasco DA; Stewart L; Dong M; Huang X; Jin R; Wilson IA; Fuller DH; Baker D
Nature; 2017 Oct; 550(7674):74-79. PubMed ID: 28953867
[TBL] [Abstract][Full Text] [Related]
35. CCBuilder 2.0: Powerful and accessible coiled-coil modeling.
Wood CW; Woolfson DN
Protein Sci; 2018 Jan; 27(1):103-111. PubMed ID: 28836317
[TBL] [Abstract][Full Text] [Related]
36. Elfin: An algorithm for the computational design of custom three-dimensional structures from modular repeat protein building blocks.
Yeh CT; Brunette TJ; Baker D; McIntosh-Smith S; Parmeggiani F
J Struct Biol; 2018 Feb; 201(2):100-107. PubMed ID: 28890160
[TBL] [Abstract][Full Text] [Related]
37. Data driven flexible backbone protein design.
Sun MGF; Kim PM
PLoS Comput Biol; 2017 Aug; 13(8):e1005722. PubMed ID: 28837553
[TBL] [Abstract][Full Text] [Related]
38. What Have We Learned from Design of Function in Large Proteins?
Khersonsky O; Fleishman SJ
Biodes Res; 2022; 2022():9787581. PubMed ID: 37850148
[TBL] [Abstract][Full Text] [Related]
39. Design and Engineering of Miniproteins.
Ożga K; Berlicki Ł
ACS Bio Med Chem Au; 2022 Aug; 2(4):316-327. PubMed ID: 37102166
[TBL] [Abstract][Full Text] [Related]
40. Distinguishing between Similar Miniproteins with Single-Molecule Nanopore Sensing: A Computational Study.
Cardoch S; Timneanu N; Caleman C; Scheicher RH
ACS Nanosci Au; 2022 Apr; 2(2):119-127. PubMed ID: 37101662
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]