These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

89 related articles for article (PubMed ID: 28870256)

  • 1. Phylo_dCor: distance correlation as a novel metric for phylogenetic profiling.
    Sferra G; Fratini F; Ponzi M; Pizzi E
    BMC Bioinformatics; 2017 Sep; 18(1):396. PubMed ID: 28870256
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Comparative assessment of performance and genome dependence among phylogenetic profiling methods.
    Snitkin ES; Gustafson AM; Mellor J; Wu J; DeLisi C
    BMC Bioinformatics; 2006 Sep; 7():420. PubMed ID: 17005048
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Protein-protein Interaction Networks of E. coli and S. cerevisiae are similar.
    Wuchty S; Uetz P
    Sci Rep; 2014 Nov; 4():7187. PubMed ID: 25431098
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Interrogating noise in protein sequences from the perspective of protein-protein interactions prediction.
    Wang Y; Ren X; Zhang C; Deng N; Zhang X
    J Theor Biol; 2012 Dec; 315():64-70. PubMed ID: 22999977
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Discovering functional linkages and uncharacterized cellular pathways using phylogenetic profile comparisons: a comprehensive assessment.
    Jothi R; Przytycka TM; Aravind L
    BMC Bioinformatics; 2007 May; 8():173. PubMed ID: 17521444
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Advancing the prediction accuracy of protein-protein interactions by utilizing evolutionary information from position-specific scoring matrix and ensemble classifier.
    Wang L; You ZH; Xia SX; Liu F; Chen X; Yan X; Zhou Y
    J Theor Biol; 2017 Apr; 418():105-110. PubMed ID: 28088356
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Evaluation of GO-based functional similarity measures using S. cerevisiae protein interaction and expression profile data.
    Xu T; Du L; Zhou Y
    BMC Bioinformatics; 2008 Nov; 9():472. PubMed ID: 18986551
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Gene interaction networks based on kernel correlation metrics.
    Cheng L; Khorasani K; Ding Y; Guo X
    Int J Comput Biol Drug Des; 2013; 6(1-2):72-92. PubMed ID: 23428475
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Overrepresentation of interactions between homologous proteins in interactomes.
    Orlowski J; Kaczanowski S; Zielenkiewicz P
    FEBS Lett; 2007 Jan; 581(1):52-6. PubMed ID: 17174313
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Prediction of metabolic fluxes from gene expression data with Huber penalty convex optimization function.
    Zhang SW; Gou WL; Li Y
    Mol Biosyst; 2017 May; 13(5):901-909. PubMed ID: 28338129
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Identification of essential proteins based on ranking edge-weights in protein-protein interaction networks.
    Wang Y; Sun H; Du W; Blanzieri E; Viero G; Xu Y; Liang Y
    PLoS One; 2014; 9(9):e108716. PubMed ID: 25268881
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Prediction of essential proteins based on subcellular localization and gene expression correlation.
    Fan Y; Tang X; Hu X; Wu W; Ping Q
    BMC Bioinformatics; 2017 Dec; 18(Suppl 13):470. PubMed ID: 29219067
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A nonlinear correlation measure with applications to gene expression data.
    Tripathi YM; Chatla SB; Chang YI; Huang LS; Shieh GS
    PLoS One; 2022; 17(6):e0270270. PubMed ID: 35727808
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Identification of Essential Proteins Based on a New Combination of Local Interaction Density and Protein Complexes.
    Luo J; Qi Y
    PLoS One; 2015; 10(6):e0131418. PubMed ID: 26125187
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Comparison of the small molecule metabolic enzymes of Escherichia coli and Saccharomyces cerevisiae.
    Jardine O; Gough J; Chothia C; Teichmann SA
    Genome Res; 2002 Jun; 12(6):916-29. PubMed ID: 12045145
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The advantage of functional prediction based on clustering of yeast genes and its correlation with non-sequence based classifications.
    Bilu Y; Linial M
    J Comput Biol; 2002; 9(2):193-210. PubMed ID: 12015877
    [TBL] [Abstract][Full Text] [Related]  

  • 17. New methods for separating causes from effects in genomics data.
    Statnikov A; Henaff M; Lytkin NI; Aliferis CF
    BMC Genomics; 2012; 13 Suppl 8(Suppl 8):S22. PubMed ID: 23282373
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Beyond synexpression relationships: local clustering of time-shifted and inverted gene expression profiles identifies new, biologically relevant interactions.
    Qian J; Dolled-Filhart M; Lin J; Yu H; Gerstein M
    J Mol Biol; 2001 Dec; 314(5):1053-66. PubMed ID: 11743722
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Combining phylogenetic profiling-based and machine learning-based techniques to predict functional related proteins.
    Lin TW; Wu JW; Chang DT
    PLoS One; 2013; 8(9):e75940. PubMed ID: 24069454
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The inference of protein-protein interactions by co-evolutionary analysis is improved by excluding the information about the phylogenetic relationships.
    Sato T; Yamanishi Y; Kanehisa M; Toh H
    Bioinformatics; 2005 Sep; 21(17):3482-9. PubMed ID: 15994190
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 5.