526 related articles for article (PubMed ID: 28890333)
1. Static and Dynamic DNA Loops form AP-1-Bound Activation Hubs during Macrophage Development.
Phanstiel DH; Van Bortle K; Spacek D; Hess GT; Shamim MS; Machol I; Love MI; Aiden EL; Bassik MC; Snyder MP
Mol Cell; 2017 Sep; 67(6):1037-1048.e6. PubMed ID: 28890333
[TBL] [Abstract][Full Text] [Related]
2. YY1 and CTCF orchestrate a 3D chromatin looping switch during early neural lineage commitment.
Beagan JA; Duong MT; Titus KR; Zhou L; Cao Z; Ma J; Lachanski CV; Gillis DR; Phillips-Cremins JE
Genome Res; 2017 Jul; 27(7):1139-1152. PubMed ID: 28536180
[TBL] [Abstract][Full Text] [Related]
3. Dynamic Rewiring of Promoter-Anchored Chromatin Loops during Adipocyte Differentiation.
Siersbæk R; Madsen JGS; Javierre BM; Nielsen R; Bagge EK; Cairns J; Wingett SW; Traynor S; Spivakov M; Fraser P; Mandrup S
Mol Cell; 2017 May; 66(3):420-435.e5. PubMed ID: 28475875
[TBL] [Abstract][Full Text] [Related]
4. Transcription Factor-Directed Re-wiring of Chromatin Architecture for Somatic Cell Nuclear Reprogramming toward trans-Differentiation.
Dall'Agnese A; Caputo L; Nicoletti C; di Iulio J; Schmitt A; Gatto S; Diao Y; Ye Z; Forcato M; Perera R; Bicciato S; Telenti A; Ren B; Puri PL
Mol Cell; 2019 Nov; 76(3):453-472.e8. PubMed ID: 31519520
[TBL] [Abstract][Full Text] [Related]
5. Granulocyte-macrophage colony-stimulating factor enhancer activation requires cooperation between NFAT and AP-1 elements and is associated with extensive nucleosome reorganization.
Johnson BV; Bert AG; Ryan GR; Condina A; Cockerill PN
Mol Cell Biol; 2004 Sep; 24(18):7914-30. PubMed ID: 15340054
[TBL] [Abstract][Full Text] [Related]
6. Mediator and cohesin connect gene expression and chromatin architecture.
Kagey MH; Newman JJ; Bilodeau S; Zhan Y; Orlando DA; van Berkum NL; Ebmeier CC; Goossens J; Rahl PB; Levine SS; Taatjes DJ; Dekker J; Young RA
Nature; 2010 Sep; 467(7314):430-5. PubMed ID: 20720539
[TBL] [Abstract][Full Text] [Related]
7. Enhancers and chromatin structures: regulatory hubs in gene expression and diseases.
Hu Z; Tee WW
Biosci Rep; 2017 Apr; 37(2):. PubMed ID: 28351896
[TBL] [Abstract][Full Text] [Related]
8. AP-1 Takes Centre Stage in Enhancer Chromatin Dynamics.
Madrigal P; Alasoo K
Trends Cell Biol; 2018 Jul; 28(7):509-511. PubMed ID: 29778529
[TBL] [Abstract][Full Text] [Related]
9. Transcription factors: building hubs in the 3D space.
Di Giammartino DC; Polyzos A; Apostolou E
Cell Cycle; 2020 Oct; 19(19):2395-2410. PubMed ID: 32783593
[TBL] [Abstract][Full Text] [Related]
10. Evolutionarily Conserved Principles Predict 3D Chromatin Organization.
Rowley MJ; Nichols MH; Lyu X; Ando-Kuri M; Rivera ISM; Hermetz K; Wang P; Ruan Y; Corces VG
Mol Cell; 2017 Sep; 67(5):837-852.e7. PubMed ID: 28826674
[TBL] [Abstract][Full Text] [Related]
11. CTCF-mediated chromatin loops enclose inducible gene regulatory domains.
Oti M; Falck J; Huynen MA; Zhou H
BMC Genomics; 2016 Mar; 17():252. PubMed ID: 27004515
[TBL] [Abstract][Full Text] [Related]
12. Oncogenic Notch Promotes Long-Range Regulatory Interactions within Hyperconnected 3D Cliques.
Petrovic J; Zhou Y; Fasolino M; Goldman N; Schwartz GW; Mumbach MR; Nguyen SC; Rome KS; Sela Y; Zapataro Z; Blacklow SC; Kruhlak MJ; Shi J; Aster JC; Joyce EF; Little SC; Vahedi G; Pear WS; Faryabi RB
Mol Cell; 2019 Mar; 73(6):1174-1190.e12. PubMed ID: 30745086
[TBL] [Abstract][Full Text] [Related]
13. Long distance relationships: enhancer-promoter communication and dynamic gene transcription.
Marsman J; Horsfield JA
Biochim Biophys Acta; 2012; 1819(11-12):1217-27. PubMed ID: 23124110
[TBL] [Abstract][Full Text] [Related]
14. The Causes and Consequences of Spatial Organization of the Genome in Regulation of Gene Expression.
Agelopoulos M; Foutadakis S; Thanos D
Front Immunol; 2021; 12():682397. PubMed ID: 34149720
[TBL] [Abstract][Full Text] [Related]
15. NFκB- and AP-1-mediated DNA looping regulates matrix metalloproteinase-9 transcription in TNF-α-treated human leukemia U937 cells.
Chen YJ; Chang LS
Biochim Biophys Acta; 2015 Oct; 1849(10):1248-59. PubMed ID: 26260845
[TBL] [Abstract][Full Text] [Related]
16. Lymphoid enhancer binding factor 1 regulates transcription through gene looping.
Yun K; So JS; Jash A; Im SH
J Immunol; 2009 Oct; 183(8):5129-37. PubMed ID: 19783677
[TBL] [Abstract][Full Text] [Related]
17. Chromatin looping and organization at developmentally regulated gene loci.
Noordermeer D; Duboule D
Wiley Interdiscip Rev Dev Biol; 2013; 2(5):615-30. PubMed ID: 24014450
[TBL] [Abstract][Full Text] [Related]
18. Mechanisms of Interplay between Transcription Factors and the 3D Genome.
Kim S; Shendure J
Mol Cell; 2019 Oct; 76(2):306-319. PubMed ID: 31521504
[TBL] [Abstract][Full Text] [Related]
19. BL-Hi-C is an efficient and sensitive approach for capturing structural and regulatory chromatin interactions.
Liang Z; Li G; Wang Z; Djekidel MN; Li Y; Qian MP; Zhang MQ; Chen Y
Nat Commun; 2017 Nov; 8(1):1622. PubMed ID: 29158486
[TBL] [Abstract][Full Text] [Related]
20. Toward predictive R-loop computational biology: genome-scale prediction of R-loops reveals their association with complex promoter structures, G-quadruplexes and transcriptionally active enhancers.
Kuznetsov VA; Bondarenko V; Wongsurawat T; Yenamandra SP; Jenjaroenpun P
Nucleic Acids Res; 2018 Sep; 46(15):7566-7585. PubMed ID: 29945198
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
