157 related articles for article (PubMed ID: 28921927)
1. Fast and cost-effective single nucleotide polymorphism (SNP) detection in the absence of a reference genome using semideep next-generation Random Amplicon Sequencing (RAMseq).
Bayerl H; Kraus RHS; Nowak C; Foerster DW; Fickel J; Kuehn R
Mol Ecol Resour; 2018 Jan; 18(1):107-117. PubMed ID: 28921927
[TBL] [Abstract][Full Text] [Related]
2. Development of novel real-time TaqMan(®) PCR assays for the species and sex identification of otter (Lutra lutra) and their application to noninvasive genetic monitoring.
O'Neill D; Turner PD; O'Meara DB; Chadwick EA; Coffey L; O'Reilly C
Mol Ecol Resour; 2013 Sep; 13(5):877-83. PubMed ID: 23870402
[TBL] [Abstract][Full Text] [Related]
3. Genotyping-in-Thousands by sequencing (GT-seq): A cost effective SNP genotyping method based on custom amplicon sequencing.
Campbell NR; Harmon SA; Narum SR
Mol Ecol Resour; 2015 Jul; 15(4):855-67. PubMed ID: 25476721
[TBL] [Abstract][Full Text] [Related]
4. SNP discovery in nonmodel organisms: strand bias and base-substitution errors reduce conversion rates.
Gonçalves da Silva A; Barendse W; Kijas JW; Barris WC; McWilliam S; Bunch RJ; McCullough R; Harrison B; Hoelzel AR; England PR
Mol Ecol Resour; 2015 Jul; 15(4):723-36. PubMed ID: 25388640
[TBL] [Abstract][Full Text] [Related]
5. Haplotyping RAD loci: an efficient method to filter paralogs and account for physical linkage.
Willis SC; Hollenbeck CM; Puritz JB; Gold JR; Portnoy DS
Mol Ecol Resour; 2017 Sep; 17(5):955-965. PubMed ID: 28042915
[TBL] [Abstract][Full Text] [Related]
6. Genomics Reveals Complex Population History and Unexpected Diversity of Eurasian Otters (Lutra lutra) in Britain Relative to Genetic Methods.
du Plessis SJ; Blaxter M; Koepfli KP; Chadwick EA; Hailer F
Mol Biol Evol; 2023 Nov; 40(11):. PubMed ID: 37713621
[TBL] [Abstract][Full Text] [Related]
7. A novel three-round multiplex PCR for SNP genotyping with next generation sequencing.
Chen K; Zhou YX; Li K; Qi LX; Zhang QF; Wang MC; Xiao JH
Anal Bioanal Chem; 2016 Jun; 408(16):4371-7. PubMed ID: 27113460
[TBL] [Abstract][Full Text] [Related]
8. Development of Nuclear Microsatellite Loci and Mitochondrial Single Nucleotide Polymorphisms for the Natterjack Toad, Bufo (Epidalea) calamita (Bufonidae), Using Next Generation Sequencing and Competitive Allele Specific PCR (KASPar).
Faucher L; Godé C; Arnaud JF
J Hered; 2016; 107(7):660-665. PubMed ID: 27634537
[TBL] [Abstract][Full Text] [Related]
9. More affordable and effective noninvasive single nucleotide polymorphism genotyping using high-throughput amplicon sequencing.
Eriksson CE; Ruprecht J; Levi T
Mol Ecol Resour; 2020 Nov; 20(6):1505-1516. PubMed ID: 32521101
[TBL] [Abstract][Full Text] [Related]
10. Low-depth genotyping-by-sequencing (GBS) in a bovine population: strategies to maximize the selection of high quality genotypes and the accuracy of imputation.
Brouard JS; Boyle B; Ibeagha-Awemu EM; Bissonnette N
BMC Genet; 2017 Apr; 18(1):32. PubMed ID: 28381212
[TBL] [Abstract][Full Text] [Related]
11. Targeted resequencing of coding DNA sequences for SNP discovery in nonmodel species.
Förster DW; Bull JK; Lenz D; Autenrieth M; Paijmans JLA; Kraus RHS; Nowak C; Bayerl H; Kuehn R; Saveljev AP; Sindičić M; Hofreiter M; Schmidt K; Fickel J
Mol Ecol Resour; 2018 Nov; 18(6):1356-1373. PubMed ID: 29978939
[TBL] [Abstract][Full Text] [Related]
12. Double-digest RAD sequencing using Ion Proton semiconductor platform (ddRADseq-ion) with nonmodel organisms.
Recknagel H; Jacobs A; Herzyk P; Elmer KR
Mol Ecol Resour; 2015 Nov; 15(6):1316-29. PubMed ID: 25808755
[TBL] [Abstract][Full Text] [Related]
13. A resource of genome-wide single-nucleotide polymorphisms generated by RAD tag sequencing in the critically endangered European eel.
Pujolar JM; Jacobsen MW; Frydenberg J; Als TD; Larsen PF; Maes GE; Zane L; Jian JB; Cheng L; Hansen MM
Mol Ecol Resour; 2013 Jul; 13(4):706-14. PubMed ID: 23656721
[TBL] [Abstract][Full Text] [Related]
14. Novel tools for conservation genomics: comparing two high-throughput approaches for SNP discovery in the transcriptome of the European hake.
Milano I; Babbucci M; Panitz F; Ogden R; Nielsen RO; Taylor MI; Helyar SJ; Carvalho GR; Espiñeira M; Atanassova M; Tinti F; Maes GE; Patarnello T; ; Bargelloni L
PLoS One; 2011; 6(11):e28008. PubMed ID: 22132191
[TBL] [Abstract][Full Text] [Related]
15. Non-Invasive Genetic Mark-Recapture as a Means to Study Population Sizes and Marking Behaviour of the Elusive Eurasian Otter (Lutra lutra).
Lampa S; Mihoub JB; Gruber B; Klenke R; Henle K
PLoS One; 2015; 10(5):e0125684. PubMed ID: 25973884
[TBL] [Abstract][Full Text] [Related]
16. Evaluating the Phylogenetic Status of the Extinct Japanese Otter on the Basis of Mitochondrial Genome Analysis.
Waku D; Segawa T; Yonezawa T; Akiyoshi A; Ishige T; Ueda M; Ogawa H; Sasaki H; Ando M; Kohno N; Sasaki T
PLoS One; 2016; 11(3):e0149341. PubMed ID: 26938434
[TBL] [Abstract][Full Text] [Related]
17. Structure of the mitochondrial control region of the Eurasian otter (Lutra lutra; Carnivora, Mustelidae): patterns of genetic heterogeneity and implications for conservation of the species in Italy.
Ketmaier V; Bernardini C
J Hered; 2005; 96(4):318-28. PubMed ID: 15731216
[TBL] [Abstract][Full Text] [Related]
18. Cross-platform compatibility of de novo-aligned SNPs in a nonmodel butterfly genus.
Campbell EO; Davis CS; Dupuis JR; Muirhead K; Sperling FAH
Mol Ecol Resour; 2017 Nov; 17(6):e84-e93. PubMed ID: 28649712
[TBL] [Abstract][Full Text] [Related]
19. Finding the right coverage: the impact of coverage and sequence quality on single nucleotide polymorphism genotyping error rates.
Fountain ED; Pauli JN; Reid BN; Palsbøll PJ; Peery MZ
Mol Ecol Resour; 2016 Jul; 16(4):966-78. PubMed ID: 26946083
[TBL] [Abstract][Full Text] [Related]
20. Isolation and characterization of 13 microsatellite loci for the Neotropical otter, Lontra longicaudis, by next generation sequencing.
Latorre-Cardenas MC; Gutiérrez-Rodríguez C; Lance SL
Mol Biol Rep; 2020 Jan; 47(1):731-736. PubMed ID: 31696429
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]