606 related articles for article (PubMed ID: 28945252)
1. Enhancer connectome in primary human cells identifies target genes of disease-associated DNA elements.
Mumbach MR; Satpathy AT; Boyle EA; Dai C; Gowen BG; Cho SW; Nguyen ML; Rubin AJ; Granja JM; Kazane KR; Wei Y; Nguyen T; Greenside PG; Corces MR; Tycko J; Simeonov DR; Suliman N; Li R; Xu J; Flynn RA; Kundaje A; Khavari PA; Marson A; Corn JE; Quertermous T; Greenleaf WJ; Chang HY
Nat Genet; 2017 Nov; 49(11):1602-1612. PubMed ID: 28945252
[TBL] [Abstract][Full Text] [Related]
2. Enhancers looping to target genes.
Trynka G
Nat Genet; 2017 Oct; 49(11):1564-1565. PubMed ID: 29074944
[TBL] [Abstract][Full Text] [Related]
3. Enhancer Connectome Nominates Target Genes of Inherited Risk Variants from Inflammatory Skin Disorders.
Jeng MY; Mumbach MR; Granja JM; Satpathy AT; Chang HY; Chang ALS
J Invest Dermatol; 2019 Mar; 139(3):605-614. PubMed ID: 30315781
[TBL] [Abstract][Full Text] [Related]
4. Mutations in the noncoding genome.
Scacheri CA; Scacheri PC
Curr Opin Pediatr; 2015 Dec; 27(6):659-64. PubMed ID: 26382709
[TBL] [Abstract][Full Text] [Related]
5. Broadening our understanding of the genetics of Juvenile Idiopathic Arthritis (JIA): Interrogation of three dimensional chromatin structures and genetic regulatory elements within JIA-associated risk loci.
Jiang K; Kessler H; Park Y; Sudman M; Thompson SD; Jarvis JN
PLoS One; 2020; 15(7):e0235857. PubMed ID: 32730263
[TBL] [Abstract][Full Text] [Related]
6. Discovery of stimulation-responsive immune enhancers with CRISPR activation.
Simeonov DR; Gowen BG; Boontanrart M; Roth TL; Gagnon JD; Mumbach MR; Satpathy AT; Lee Y; Bray NL; Chan AY; Lituiev DS; Nguyen ML; Gate RE; Subramaniam M; Li Z; Woo JM; Mitros T; Ray GJ; Curie GL; Naddaf N; Chu JS; Ma H; Boyer E; Van Gool F; Huang H; Liu R; Tobin VR; Schumann K; Daly MJ; Farh KK; Ansel KM; Ye CJ; Greenleaf WJ; Anderson MS; Bluestone JA; Chang HY; Corn JE; Marson A
Nature; 2017 Sep; 549(7670):111-115. PubMed ID: 28854172
[TBL] [Abstract][Full Text] [Related]
7. Systematic mapping of functional enhancer-promoter connections with CRISPR interference.
Fulco CP; Munschauer M; Anyoha R; Munson G; Grossman SR; Perez EM; Kane M; Cleary B; Lander ES; Engreitz JM
Science; 2016 Nov; 354(6313):769-773. PubMed ID: 27708057
[TBL] [Abstract][Full Text] [Related]
8. Activity-by-contact model of enhancer-promoter regulation from thousands of CRISPR perturbations.
Fulco CP; Nasser J; Jones TR; Munson G; Bergman DT; Subramanian V; Grossman SR; Anyoha R; Doughty BR; Patwardhan TA; Nguyen TH; Kane M; Perez EM; Durand NC; Lareau CA; Stamenova EK; Aiden EL; Lander ES; Engreitz JM
Nat Genet; 2019 Dec; 51(12):1664-1669. PubMed ID: 31784727
[TBL] [Abstract][Full Text] [Related]
9. Analysis of chromatin organization and gene expression in T cells identifies functional genes for rheumatoid arthritis.
Yang J; McGovern A; Martin P; Duffus K; Ge X; Zarrineh P; Morris AP; Adamson A; Fraser P; Rattray M; Eyre S
Nat Commun; 2020 Sep; 11(1):4402. PubMed ID: 32879318
[TBL] [Abstract][Full Text] [Related]
10. Genome-wide mapping of transcriptional enhancer candidates using DNA and chromatin features in maize.
Oka R; Zicola J; Weber B; Anderson SN; Hodgman C; Gent JI; Wesselink JJ; Springer NM; Hoefsloot HCJ; Turck F; Stam M
Genome Biol; 2017 Jul; 18(1):137. PubMed ID: 28732548
[TBL] [Abstract][Full Text] [Related]
11. H3K27ac HiChIP in prostate cell lines identifies risk genes for prostate cancer susceptibility.
Giambartolomei C; Seo JH; Schwarz T; Freund MK; Johnson RD; Spisak S; Baca SC; Gusev A; Mancuso N; Pasaniuc B; Freedman ML
Am J Hum Genet; 2021 Dec; 108(12):2284-2300. PubMed ID: 34822763
[TBL] [Abstract][Full Text] [Related]
12. CRISPR Inversion of CTCF Sites Alters Genome Topology and Enhancer/Promoter Function.
Guo Y; Xu Q; Canzio D; Shou J; Li J; Gorkin DU; Jung I; Wu H; Zhai Y; Tang Y; Lu Y; Wu Y; Jia Z; Li W; Zhang MQ; Ren B; Krainer AR; Maniatis T; Wu Q
Cell; 2015 Aug; 162(4):900-10. PubMed ID: 26276636
[TBL] [Abstract][Full Text] [Related]
13. Multiple single nucleotide polymorphisms in the first intron of the IL2RA gene affect transcription factor binding and enhancer activity.
Schwartz AM; Demin DE; Vorontsov IE; Kasyanov AS; Putlyaeva LV; Tatosyan KA; Kulakovskiy IV; Kuprash DV
Gene; 2017 Feb; 602():50-56. PubMed ID: 27876533
[TBL] [Abstract][Full Text] [Related]
14. Mapping cis-regulatory chromatin contacts in neural cells links neuropsychiatric disorder risk variants to target genes.
Song M; Yang X; Ren X; Maliskova L; Li B; Jones IR; Wang C; Jacob F; Wu K; Traglia M; Tam TW; Jamieson K; Lu SY; Ming GL; Li Y; Yao J; Weiss LA; Dixon JR; Judge LM; Conklin BR; Song H; Gan L; Shen Y
Nat Genet; 2019 Aug; 51(8):1252-1262. PubMed ID: 31367015
[TBL] [Abstract][Full Text] [Related]
15. Hematopoietic/erythroid enhancers activate nearby target genes by extending histone H3K27ac and transcribing intergenic RNA.
Kim YW; Kang J; Kim A
FASEB J; 2023 Apr; 37(4):e22870. PubMed ID: 36929052
[TBL] [Abstract][Full Text] [Related]
16. Super-Enhancers at the Nanog Locus Differentially Regulate Neighboring Pluripotency-Associated Genes.
Blinka S; Reimer MH; Pulakanti K; Rao S
Cell Rep; 2016 Sep; 17(1):19-28. PubMed ID: 27681417
[TBL] [Abstract][Full Text] [Related]
17. Functional Analysis of a Novel Genome-Wide Association Study Signal in SMAD3 That Confers Protection From Coronary Artery Disease.
Turner AW; Martinuk A; Silva A; Lau P; Nikpay M; Eriksson P; Folkersen L; Perisic L; Hedin U; Soubeyrand S; McPherson R
Arterioscler Thromb Vasc Biol; 2016 May; 36(5):972-83. PubMed ID: 26966274
[TBL] [Abstract][Full Text] [Related]
18. An atlas of transcribed enhancers across helper T cell diversity for decoding human diseases.
Oguchi A; Suzuki A; Komatsu S; Yoshitomi H; Bhagat S; Son R; Bonnal RJP; Kojima S; Koido M; Takeuchi K; Myouzen K; Inoue G; Hirai T; Sano H; Takegami Y; Kanemaru A; Yamaguchi I; Ishikawa Y; Tanaka N; Hirabayashi S; Konishi R; Sekito S; Inoue T; Kere J; Takeda S; Takaori-Kondo A; Endo I; Kawaoka S; Kawaji H; Ishigaki K; Ueno H; Hayashizaki Y; Pagani M; Carninci P; Yanagita M; ; Parrish N; Terao C; Yamamoto K; Murakawa Y;
Science; 2024 Jul; 385(6704):eadd8394. PubMed ID: 38963856
[TBL] [Abstract][Full Text] [Related]
19. Identifying functional noncoding variants from genome-wide association studies for cardiovascular disease and related traits.
Smith AJ; Humphries SE; Talmud PJ
Curr Opin Lipidol; 2015 Apr; 26(2):120-6. PubMed ID: 25692342
[TBL] [Abstract][Full Text] [Related]
20. Primary effusion lymphoma enhancer connectome links super-enhancers to dependency factors.
Wang C; Zhang L; Ke L; Ding W; Jiang S; Li D; Narita Y; Hou I; Liang J; Li S; Xiao H; Gottwein E; Kaye KM; Teng M; Zhao B
Nat Commun; 2020 Dec; 11(1):6318. PubMed ID: 33298918
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
