BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

761 related articles for article (PubMed ID: 28957321)

  • 1. Identification of breast cancer associated variants that modulate transcription factor binding.
    Liu Y; Walavalkar NM; Dozmorov MG; Rich SS; Civelek M; Guertin MJ
    PLoS Genet; 2017 Sep; 13(9):e1006761. PubMed ID: 28957321
    [TBL] [Abstract][Full Text] [Related]  

  • 2. On the identification of potential regulatory variants within genome wide association candidate SNP sets.
    Chen CY; Chang IS; Hsiung CA; Wasserman WW
    BMC Med Genomics; 2014 Jun; 7():34. PubMed ID: 24920305
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Comprehensive functional annotation of seventy-one breast cancer risk Loci.
    Rhie SK; Coetzee SG; Noushmehr H; Yan C; Kim JM; Haiman CA; Coetzee GA
    PLoS One; 2013; 8(5):e63925. PubMed ID: 23717510
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Functional analysis of low-grade glioma genetic variants predicts key target genes and transcription factors.
    Manjunath M; Yan J; Youn Y; Drucker KL; Kollmeyer TM; McKinney AM; Zazubovich V; Zhang Y; Costello JF; Eckel-Passow J; Selvin PR; Jenkins RB; Song JS
    Neuro Oncol; 2021 Apr; 23(4):638-649. PubMed ID: 33130899
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Integrative Genomic Analysis Predicts Causative
    Zhang Y; Manjunath M; Zhang S; Chasman D; Roy S; Song JS
    Cancer Res; 2018 Apr; 78(7):1579-1591. PubMed ID: 29351903
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Integrative analysis of liver-specific non-coding regulatory SNPs associated with the risk of coronary artery disease.
    Selvarajan I; Toropainen A; Garske KM; López Rodríguez M; Ko A; Miao Z; Kaminska D; Õunap K; Örd T; Ravindran A; Liu OH; Moreau PR; Jawahar Deen A; Männistö V; Pan C; Levonen AL; Lusis AJ; Heikkinen S; Romanoski CE; Pihlajamäki J; Pajukanta P; Kaikkonen MU
    Am J Hum Genet; 2021 Mar; 108(3):411-430. PubMed ID: 33626337
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Computational Analysis of Breast Cancer GWAS Loci Identifies the Putative Deleterious Effect of STXBP4 and ZNF404 Gene Variants.
    Masoodi TA; Banaganapalli B; Vaidyanathan V; Talluri VR; Shaik NA
    J Cell Biochem; 2017 Dec; 118(12):4296-4307. PubMed ID: 28422318
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Functional genomics elucidates regulatory mechanisms of Parkinson's disease-associated variants.
    Chen R; Liu J; Li S; Li X; Huo Y; Yao YG; Xiao X; Li M; Luo XJ
    BMC Med; 2022 Feb; 20(1):68. PubMed ID: 35168626
    [TBL] [Abstract][Full Text] [Related]  

  • 9. RNAseq analysis of bronchial epithelial cells to identify COPD-associated genes and SNPs.
    Yeo J; Morales DA; Chen T; Crawford EL; Zhang X; Blomquist TM; Levin AM; Massion PP; Arenberg DA; Midthun DE; Mazzone PJ; Nathan SD; Wainz RJ; Nana-Sinkam P; Willey PFS; Arend TJ; Padda K; Qiu S; Federov A; Hernandez DR; Hammersley JR; Yoon Y; Safi F; Khuder SA; Willey JC
    BMC Pulm Med; 2018 Mar; 18(1):42. PubMed ID: 29506519
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Functional genomic analysis delineates regulatory mechanisms of GWAS-identified bipolar disorder risk variants.
    Chen R; Yang Z; Liu J; Cai X; Huo Y; Zhang Z; Li M; Chang H; Luo XJ
    Genome Med; 2022 May; 14(1):53. PubMed ID: 35590387
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Which Genetics Variants in DNase-Seq Footprints Are More Likely to Alter Binding?
    Moyerbrailean GA; Kalita CA; Harvey CT; Wen X; Luca F; Pique-Regi R
    PLoS Genet; 2016 Feb; 12(2):e1005875. PubMed ID: 26901046
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Integration of VDR genome wide binding and GWAS genetic variation data reveals co-occurrence of VDR and NF-κB binding that is linked to immune phenotypes.
    Singh PK; van den Berg PR; Long MD; Vreugdenhil A; Grieshober L; Ochs-Balcom HM; Wang J; Delcambre S; Heikkinen S; Carlberg C; Campbell MJ; Sucheston-Campbell LE
    BMC Genomics; 2017 Feb; 18(1):132. PubMed ID: 28166722
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Genetic regulatory signatures underlying islet gene expression and type 2 diabetes.
    Varshney A; Scott LJ; Welch RP; Erdos MR; Chines PS; Narisu N; Albanus RD; Orchard P; Wolford BN; Kursawe R; Vadlamudi S; Cannon ME; Didion JP; Hensley J; Kirilusha A; ; Bonnycastle LL; Taylor DL; Watanabe R; Mohlke KL; Boehnke M; Collins FS; Parker SC; Stitzel ML
    Proc Natl Acad Sci U S A; 2017 Feb; 114(9):2301-2306. PubMed ID: 28193859
    [TBL] [Abstract][Full Text] [Related]  

  • 14. regQTLs: Single nucleotide polymorphisms that modulate microRNA regulation of gene expression in tumors.
    Wilk G; Braun R
    PLoS Genet; 2018 Dec; 14(12):e1007837. PubMed ID: 30557297
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Identification and validation of regulatory SNPs that modulate transcription factor chromatin binding and gene expression in prostate cancer.
    Jin HJ; Jung S; DebRoy AR; Davuluri RV
    Oncotarget; 2016 Aug; 7(34):54616-54626. PubMed ID: 27409348
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Prioritizing cardiovascular disease-associated variants altering NKX2-5 and TBX5 binding through an integrative computational approach.
    Peña-Martínez EG; Pomales-Matos DA; Rivera-Madera A; Messon-Bird JL; Medina-Feliciano JG; Sanabria-Alberto L; Barreiro-Rosario AC; Rivera-Del Valle J; Rodríguez-Ríos JM; Rodríguez-Martínez JA
    J Biol Chem; 2023 Dec; 299(12):105423. PubMed ID: 37926287
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Transcription factor-binding k-mer analysis clarifies the cell type dependency of binding specificities and cis-regulatory SNPs in humans.
    Tahara S; Tsuchiya T; Matsumoto H; Ozaki H
    BMC Genomics; 2023 Oct; 24(1):597. PubMed ID: 37805453
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Bioinformatics pipeline to guide late-onset Alzheimer's disease (LOAD) post-GWAS studies: Prioritizing transcription regulatory variants within LOAD-associated regions.
    Lutz MW; Chiba-Falek O
    Alzheimers Dement (N Y); 2022; 8(1):e12244. PubMed ID: 35229021
    [TBL] [Abstract][Full Text] [Related]  

  • 19. An integrative functional genomics framework for effective identification of novel regulatory variants in genome-phenome studies.
    Zhao J; Cheng F; Jia P; Cox N; Denny JC; Zhao Z
    Genome Med; 2018 Jan; 10(1):7. PubMed ID: 29378629
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Breast cancer risk-associated SNPs modulate the affinity of chromatin for FOXA1 and alter gene expression.
    Cowper-Sal lari R; Zhang X; Wright JB; Bailey SD; Cole MD; Eeckhoute J; Moore JH; Lupien M
    Nat Genet; 2012 Nov; 44(11):1191-8. PubMed ID: 23001124
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 39.