160 related articles for article (PubMed ID: 28961691)
1. 3DBIONOTES v2.0: a web server for the automatic annotation of macromolecular structures.
Segura J; Sanchez-Garcia R; Martinez M; Cuenca-Alba J; Tabas-Madrid D; Sorzano COS; Carazo JM
Bioinformatics; 2017 Nov; 33(22):3655-3657. PubMed ID: 28961691
[TBL] [Abstract][Full Text] [Related]
2. 3DBIONOTES v3.0: crossing molecular and structural biology data with genomic variations.
Segura J; Sanchez-Garcia R; Sorzano COS; Carazo JM
Bioinformatics; 2019 Sep; 35(18):3512-3513. PubMed ID: 30768147
[TBL] [Abstract][Full Text] [Related]
3. 3DBIONOTES: A unified, enriched and interactive view of macromolecular information.
Tabas-Madrid D; Segura J; Sanchez-Garcia R; Cuenca-Alba J; Sorzano CO; Carazo JM
J Struct Biol; 2016 May; 194(2):231-4. PubMed ID: 26873783
[TBL] [Abstract][Full Text] [Related]
4. 3DBionotes COVID-19 edition.
Macias JR; Sanchez-Garcia R; Conesa P; Ramirez-Aportela E; Martinez Gonzalez M; Wert-Carvajal C; Parra-Perez AM; Segura Mora J; Horrell S; Thorn A; Sorzano COS; Carazo JM
Bioinformatics; 2021 Nov; 37(22):4258-4260. PubMed ID: 34014278
[TBL] [Abstract][Full Text] [Related]
5. Studying the co-evolution of protein families with the Mirrortree web server.
Ochoa D; Pazos F
Bioinformatics; 2010 May; 26(10):1370-1. PubMed ID: 20363731
[TBL] [Abstract][Full Text] [Related]
6. AVIA v2.0: annotation, visualization and impact analysis of genomic variants and genes.
Vuong H; Che A; Ravichandran S; Luke BT; Collins JR; Mudunuri US
Bioinformatics; 2015 Aug; 31(16):2748-50. PubMed ID: 25861966
[TBL] [Abstract][Full Text] [Related]
7. MBRole: enrichment analysis of metabolomic data.
Chagoyen M; Pazos F
Bioinformatics; 2011 Mar; 27(5):730-1. PubMed ID: 21208985
[TBL] [Abstract][Full Text] [Related]
8. Bacterial Feature Finder (BaFF)-a system for extracting features overrepresented in sets of prokaryotic organisms.
López-Ibáñez J; Martín LT; Chagoyen M; Pazos F
Bioinformatics; 2019 Sep; 35(18):3482-3483. PubMed ID: 30844057
[TBL] [Abstract][Full Text] [Related]
9. ClusPro PeptiDock: efficient global docking of peptide recognition motifs using FFT.
Porter KA; Xia B; Beglov D; Bohnuud T; Alam N; Schueler-Furman O; Kozakov D
Bioinformatics; 2017 Oct; 33(20):3299-3301. PubMed ID: 28430871
[TBL] [Abstract][Full Text] [Related]
10. COPRED: prediction of fold, GO molecular function and functional residues at the domain level.
López D; Pazos F
Bioinformatics; 2013 Jul; 29(14):1811-2. PubMed ID: 23720488
[TBL] [Abstract][Full Text] [Related]
11. FILTREST3D: discrimination of structural models using restraints from experimental data.
Gajda MJ; Tuszynska I; Kaczor M; Bakulina AY; Bujnicki JM
Bioinformatics; 2010 Dec; 26(23):2986-7. PubMed ID: 20956242
[TBL] [Abstract][Full Text] [Related]
12. WS-SNPs&GO: a web server for predicting the deleterious effect of human protein variants using functional annotation.
Capriotti E; Calabrese R; Fariselli P; Martelli PL; Altman RB; Casadio R
BMC Genomics; 2013; 14 Suppl 3(Suppl 3):S6. PubMed ID: 23819482
[TBL] [Abstract][Full Text] [Related]
13. The visualCMAT: A web-server to select and interpret correlated mutations/co-evolving residues in protein families.
Suplatov D; Sharapova Y; Timonina D; Kopylov K; Švedas V
J Bioinform Comput Biol; 2018 Apr; 16(2):1840005. PubMed ID: 29361894
[TBL] [Abstract][Full Text] [Related]
14. Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank.
Prlic A; Kalro T; Bhattacharya R; Christie C; Burley SK; Rose PW
Bioinformatics; 2016 Dec; 32(24):3833-3835. PubMed ID: 27551105
[TBL] [Abstract][Full Text] [Related]
15. DelPhiForce web server: electrostatic forces and energy calculations and visualization.
Li L; Jia Z; Peng Y; Chakravorty A; Sun L; Alexov E
Bioinformatics; 2017 Nov; 33(22):3661-3663. PubMed ID: 29036596
[TBL] [Abstract][Full Text] [Related]
16. Evolutionary Trace Annotation Server: automated enzyme function prediction in protein structures using 3D templates.
Ward RM; Venner E; Daines B; Murray S; Erdin S; Kristensen DM; Lichtarge O
Bioinformatics; 2009 Jun; 25(11):1426-7. PubMed ID: 19307237
[TBL] [Abstract][Full Text] [Related]
17. 3dLOGO: a web server for the identification, analysis and use of conserved protein substructures.
Via A; Peluso D; Gherardini PF; de Rinaldis E; Colombo T; Ausiello G; Helmer-Citterich M
Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W416-9. PubMed ID: 17488847
[TBL] [Abstract][Full Text] [Related]
18. Predicting functional sites with an automated algorithm suitable for heterogeneous datasets.
La D; Livesay DR
BMC Bioinformatics; 2005 May; 6():116. PubMed ID: 15890082
[TBL] [Abstract][Full Text] [Related]
19. The LabelHash server and tools for substructure-based functional annotation.
Moll M; Bryant DH; Kavraki LE
Bioinformatics; 2011 Aug; 27(15):2161-2. PubMed ID: 21659320
[TBL] [Abstract][Full Text] [Related]
20. 3dRPC: a web server for 3D RNA-protein structure prediction.
Huang Y; Li H; Xiao Y
Bioinformatics; 2018 Apr; 34(7):1238-1240. PubMed ID: 29186336
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
