These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
2. New developments of alignment-free sequence comparison: measures, statistics and next-generation sequencing. Song K; Ren J; Reinert G; Deng M; Waterman MS; Sun F Brief Bioinform; 2014 May; 15(3):343-53. PubMed ID: 24064230 [TBL] [Abstract][Full Text] [Related]
7. Information theory applications for biological sequence analysis. Vinga S Brief Bioinform; 2014 May; 15(3):376-89. PubMed ID: 24058049 [TBL] [Abstract][Full Text] [Related]
8. Using MUMmer to identify similar regions in large sequence sets. Delcher AL; Salzberg SL; Phillippy AM Curr Protoc Bioinformatics; 2003 Feb; Chapter 10():Unit 10.3. PubMed ID: 18428693 [TBL] [Abstract][Full Text] [Related]
9. Gap mapping: a paradigm for aligning two sequences. Bellgard M; Gamble T; Reynolds M; Hunter A; Trifonov E; Taplin R Appl Bioinformatics; 2003; 2(3 Suppl):S31-5. PubMed ID: 15130814 [TBL] [Abstract][Full Text] [Related]
10. A Review of Parallel Implementations for the Smith-Waterman Algorithm. Xia Z; Cui Y; Zhang A; Tang T; Peng L; Huang C; Yang C; Liao X Interdiscip Sci; 2022 Mar; 14(1):1-14. PubMed ID: 34487327 [TBL] [Abstract][Full Text] [Related]
11. [Alignment-free biomolecular sequence comparison method]. Fu W; Wang Y; Lu D Sheng Wu Yi Xue Gong Cheng Xue Za Zhi; 2005 Jun; 22(3):598-601, 605. PubMed ID: 16013268 [TBL] [Abstract][Full Text] [Related]
12. tPatternHunter: gapped, fast and sensitive translated homology search. Kisman D; Li M; Ma B; Wang L Bioinformatics; 2005 Feb; 21(4):542-4. PubMed ID: 15374861 [TBL] [Abstract][Full Text] [Related]
13. Finding homologs to nucleic acid or protein sequences using the framesearch program. Healy M Curr Protoc Bioinformatics; 2002 Aug; Chapter 3():Unit 3.2. PubMed ID: 18792937 [TBL] [Abstract][Full Text] [Related]
14. Review of alignment and SNP calling algorithms for next-generation sequencing data. Mielczarek M; Szyda J J Appl Genet; 2016 Feb; 57(1):71-9. PubMed ID: 26055432 [TBL] [Abstract][Full Text] [Related]