253 related articles for article (PubMed ID: 28994825)
1. Clustergrammer, a web-based heatmap visualization and analysis tool for high-dimensional biological data.
Fernandez NF; Gundersen GW; Rahman A; Grimes ML; Rikova K; Hornbeck P; Ma'ayan A
Sci Data; 2017 Oct; 4():170151. PubMed ID: 28994825
[TBL] [Abstract][Full Text] [Related]
2. BioJupies: Automated Generation of Interactive Notebooks for RNA-Seq Data Analysis in the Cloud.
Torre D; Lachmann A; Ma'ayan A
Cell Syst; 2018 Nov; 7(5):556-561.e3. PubMed ID: 30447998
[TBL] [Abstract][Full Text] [Related]
3. shinyheatmap: Ultra fast low memory heatmap web interface for big data genomics.
Khomtchouk BB; Hennessy JR; Wahlestedt C
PLoS One; 2017; 12(5):e0176334. PubMed ID: 28493881
[TBL] [Abstract][Full Text] [Related]
4. Appyters: Turning Jupyter Notebooks into data-driven web apps.
Clarke DJB; Jeon M; Stein DJ; Moiseyev N; Kropiwnicki E; Dai C; Xie Z; Wojciechowicz ML; Litz S; Hom J; Evangelista JE; Goldman L; Zhang S; Yoon C; Ahamed T; Bhuiyan S; Cheng M; Karam J; Jagodnik KM; Shu I; Lachmann A; Ayling S; Jenkins SL; Ma'ayan A
Patterns (N Y); 2021 Mar; 2(3):100213. PubMed ID: 33748796
[TBL] [Abstract][Full Text] [Related]
5. Epiviz Web Components: reusable and extensible component library to visualize functional genomic datasets.
Kancherla J; Zhang A; Gottfried B; Bravo HC
F1000Res; 2018; 7():1096. PubMed ID: 30135734
[TBL] [Abstract][Full Text] [Related]
6. InCHlib - interactive cluster heatmap for web applications.
Skuta C; Bartůněk P; Svozil D
J Cheminform; 2014 Dec; 6(1):44. PubMed ID: 25264459
[TBL] [Abstract][Full Text] [Related]
7. INVEX--a web-based tool for integrative visualization of expression data.
Xia J; Lyle NH; Mayer ML; Pena OM; Hancock RE
Bioinformatics; 2013 Dec; 29(24):3232-4. PubMed ID: 24078684
[TBL] [Abstract][Full Text] [Related]
8. Advances in proteomics data analysis and display using an accurate mass and time tag approach.
Zimmer JS; Monroe ME; Qian WJ; Smith RD
Mass Spectrom Rev; 2006; 25(3):450-82. PubMed ID: 16429408
[TBL] [Abstract][Full Text] [Related]
9. HemI 2.0: an online service for heatmap illustration.
Ning W; Wei Y; Gao L; Han C; Gou Y; Fu S; Liu D; Zhang C; Huang X; Wu S; Peng D; Wang C; Xue Y
Nucleic Acids Res; 2022 Jul; 50(W1):W405-W411. PubMed ID: 35670661
[TBL] [Abstract][Full Text] [Related]
10. A Galaxy Implementation of Next-Generation Clustered Heatmaps for Interactive Exploration of Molecular Profiling Data.
Broom BM; Ryan MC; Brown RE; Ikeda F; Stucky M; Kane DW; Melott J; Wakefield C; Casasent TD; Akbani R; Weinstein JN
Cancer Res; 2017 Nov; 77(21):e23-e26. PubMed ID: 29092932
[TBL] [Abstract][Full Text] [Related]
11. Fractalis: a scalable open-source service for platform-independent interactive visual analysis of biomedical data.
Herzinger S; Grouès V; Gu W; Satagopam V; Banda P; Trefois C; Schneider R
Gigascience; 2018 Sep; 7(9):. PubMed ID: 30165440
[TBL] [Abstract][Full Text] [Related]
12. VESPA: software to facilitate genomic annotation of prokaryotic organisms through integration of proteomic and transcriptomic data.
Peterson ES; McCue LA; Schrimpe-Rutledge AC; Jensen JL; Walker H; Kobold MA; Webb SR; Payne SH; Ansong C; Adkins JN; Cannon WR; Webb-Robertson BJ
BMC Genomics; 2012 Apr; 13():131. PubMed ID: 22480257
[TBL] [Abstract][Full Text] [Related]
13. Using ExpressAnalyst for Comprehensive Gene Expression Analysis in Model and Non-Model Organisms.
Ewald J; Zhou G; Lu Y; Xia J
Curr Protoc; 2023 Nov; 3(11):e922. PubMed ID: 37929753
[TBL] [Abstract][Full Text] [Related]
14. HemI: a toolkit for illustrating heatmaps.
Deng W; Wang Y; Liu Z; Cheng H; Xue Y
PLoS One; 2014; 9(11):e111988. PubMed ID: 25372567
[TBL] [Abstract][Full Text] [Related]
15. PathRings: a web-based tool for exploration of ortholog and expression data in biological pathways.
Zhu Y; Sun L; Garbarino A; Schmidt C; Fang J; Chen J
BMC Bioinformatics; 2015 May; 16(1):165. PubMed ID: 25982732
[TBL] [Abstract][Full Text] [Related]
16. ClustVis: a web tool for visualizing clustering of multivariate data using Principal Component Analysis and heatmap.
Metsalu T; Vilo J
Nucleic Acids Res; 2015 Jul; 43(W1):W566-70. PubMed ID: 25969447
[TBL] [Abstract][Full Text] [Related]
17. pairheatmap: comparing expression profiles of gene groups in heatmaps.
Sun X; Li J
Comput Methods Programs Biomed; 2013 Dec; 112(3):599-606. PubMed ID: 24016862
[TBL] [Abstract][Full Text] [Related]
18. Panomicon: A web-based environment for interactive, visual analysis of multi-omics data.
Allendes Osorio RS; Nyström-Persson JT; Nojima Y; Kosugi Y; Mizuguchi K; Natsume-Kitatani Y
Heliyon; 2020 Aug; 6(8):e04618. PubMed ID: 32904262
[TBL] [Abstract][Full Text] [Related]
19. ideal: an R/Bioconductor package for interactive differential expression analysis.
Marini F; Linke J; Binder H
BMC Bioinformatics; 2020 Dec; 21(1):565. PubMed ID: 33297942
[TBL] [Abstract][Full Text] [Related]
20. i2dash: Creation of Flexible, Interactive, and Web-based Dashboards for Visualization of Omics Data.
Ustjanzew A; Preussner J; Bentsen M; Kuenne C; Looso M
Genomics Proteomics Bioinformatics; 2022 Jun; 20(3):568-577. PubMed ID: 34280547
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
