BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

283 related articles for article (PubMed ID: 29031843)

  • 21. Analysis of sequencing data for probing RNA secondary structures and protein-RNA binding in studying posttranscriptional regulations.
    Hu X; Wu Y; Lu ZJ; Yip KY
    Brief Bioinform; 2016 Nov; 17(6):1032-1043. PubMed ID: 26655457
    [TBL] [Abstract][Full Text] [Related]  

  • 22. RNAex: an RNA secondary structure prediction server enhanced by high-throughput structure-probing data.
    Wu Y; Qu R; Huang Y; Shi B; Liu M; Li Y; Lu ZJ
    Nucleic Acids Res; 2016 Jul; 44(W1):W294-301. PubMed ID: 27137891
    [TBL] [Abstract][Full Text] [Related]  

  • 23. A comprehensive database of high-throughput sequencing-based RNA secondary structure probing data (Structure Surfer).
    Berkowitz ND; Silverman IM; Childress DM; Kazan H; Wang LS; Gregory BD
    BMC Bioinformatics; 2016 May; 17(1):215. PubMed ID: 27188311
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Measuring RNA structure transcriptome-wide with icSHAPE.
    Chan D; Feng C; Spitale RC
    Methods; 2017 May; 120():85-90. PubMed ID: 28336307
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Probing RNA structure in vivo.
    Mitchell D; Assmann SM; Bevilacqua PC
    Curr Opin Struct Biol; 2019 Dec; 59():151-158. PubMed ID: 31521910
    [TBL] [Abstract][Full Text] [Related]  

  • 26. RSVdb: a comprehensive database of transcriptome RNA structure.
    Yu H; Zhang Y; Sun Q; Gao H; Tao S
    Brief Bioinform; 2021 May; 22(3):. PubMed ID: 32382747
    [TBL] [Abstract][Full Text] [Related]  

  • 27. The intricate relationship between RNA structure, editing, and splicing.
    Rieder LE; Reenan RA
    Semin Cell Dev Biol; 2012 May; 23(3):281-8. PubMed ID: 22178616
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Differential analysis of RNA structure probing experiments at nucleotide resolution: uncovering regulatory functions of RNA structure.
    Yu B; Li P; Zhang QC; Hou L
    Nat Commun; 2022 Jul; 13(1):4227. PubMed ID: 35869080
    [TBL] [Abstract][Full Text] [Related]  

  • 29. High-Throughput Nuclease Probing of RNA Structures Using FragSeq.
    Uzilov AV; Underwood JG
    Methods Mol Biol; 2016; 1490():105-34. PubMed ID: 27665596
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Parallel computation of genome-scale RNA secondary structure to detect structural constraints on human genome.
    Kawaguchi R; Kiryu H
    BMC Bioinformatics; 2016 May; 17(1):203. PubMed ID: 27153986
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Group II introns: structure, folding and splicing mechanism.
    Fedorova O; Zingler N
    Biol Chem; 2007 Jul; 388(7):665-78. PubMed ID: 17570818
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Structures of RNA switches: insight into molecular recognition and tertiary structure.
    Schwalbe H; Buck J; Fürtig B; Noeske J; Wöhnert J
    Angew Chem Int Ed Engl; 2007; 46(8):1212-9. PubMed ID: 17226886
    [TBL] [Abstract][Full Text] [Related]  

  • 33. RNA: riboSNitches reveal heredity in RNA secondary structure.
    Lokody I
    Nat Rev Genet; 2014 Apr; 15(4):219. PubMed ID: 24535248
    [No Abstract]   [Full Text] [Related]  

  • 34. New Era of Studying RNA Secondary Structure and Its Influence on Gene Regulation in Plants.
    Yang X; Yang M; Deng H; Ding Y
    Front Plant Sci; 2018; 9():671. PubMed ID: 29872445
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Experimental and computational techniques for studying structural dynamics and function of RNA.
    Ermolenko DN; Whitford PC
    Methods; 2019 Jun; 162-163():1-2. PubMed ID: 31229650
    [No Abstract]   [Full Text] [Related]  

  • 36. FragSeq: transcriptome-wide RNA structure probing using high-throughput sequencing.
    Underwood JG; Uzilov AV; Katzman S; Onodera CS; Mainzer JE; Mathews DH; Lowe TM; Salama SR; Haussler D
    Nat Methods; 2010 Dec; 7(12):995-1001. PubMed ID: 21057495
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Structural analysis of RNA backbone using in-line probing.
    Nahvi A; Green R
    Methods Enzymol; 2013; 530():381-97. PubMed ID: 24034334
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Computational analysis of RNA structures with chemical probing data.
    Ge P; Zhang S
    Methods; 2015 Jun; 79-80():60-6. PubMed ID: 25687190
    [TBL] [Abstract][Full Text] [Related]  

  • 39. The Conservation and Function of RNA Secondary Structure in Plants.
    Vandivier LE; Anderson SJ; Foley SW; Gregory BD
    Annu Rev Plant Biol; 2016 Apr; 67():463-88. PubMed ID: 26865341
    [TBL] [Abstract][Full Text] [Related]  

  • 40. dStruct: identifying differentially reactive regions from RNA structurome profiling data.
    Choudhary K; Lai YH; Tran EJ; Aviran S
    Genome Biol; 2019 Feb; 20(1):40. PubMed ID: 30791935
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 15.