1228 related articles for article (PubMed ID: 29035372)
1. MMseqs2 enables sensitive protein sequence searching for the analysis of massive data sets.
Steinegger M; Söding J
Nat Biotechnol; 2017 Nov; 35(11):1026-1028. PubMed ID: 29035372
[No Abstract] [Full Text] [Related]
2. pFind: a novel database-searching software system for automated peptide and protein identification via tandem mass spectrometry.
Li D; Fu Y; Sun R; Ling CX; Wei Y; Zhou H; Zeng R; Yang Q; He S; Gao W
Bioinformatics; 2005 Jul; 21(13):3049-50. PubMed ID: 15817687
[TBL] [Abstract][Full Text] [Related]
3. Sequence Similarity Searching.
Hu G; Kurgan L
Curr Protoc Protein Sci; 2019 Feb; 95(1):e71. PubMed ID: 30102464
[TBL] [Abstract][Full Text] [Related]
4. MagicMatch--cross-referencing sequence identifiers across databases.
Smith M; Kunin V; Goldovsky L; Enright AJ; Ouzounis CA
Bioinformatics; 2005 Aug; 21(16):3429-30. PubMed ID: 15961438
[TBL] [Abstract][Full Text] [Related]
5. Using relational databases for improved sequence similarity searching and large-scale genomic analyses.
Mackey AJ; Pearson WR
Curr Protoc Bioinformatics; 2004 Oct; Chapter 9():Unit 9.4. PubMed ID: 18428739
[TBL] [Abstract][Full Text] [Related]
6. CoC: a database of universally conserved residues in protein folds.
Donald JE; Hubner IA; Rotemberg VM; Shakhnovich EI; Mirny LA
Bioinformatics; 2005 May; 21(10):2539-40. PubMed ID: 15746286
[TBL] [Abstract][Full Text] [Related]
7. QuickTree: building huge Neighbour-Joining trees of protein sequences.
Howe K; Bateman A; Durbin R
Bioinformatics; 2002 Nov; 18(11):1546-7. PubMed ID: 12424131
[TBL] [Abstract][Full Text] [Related]
8. PfamAlyzer: domain-centric homology search.
Hollich V; Sonnhammer EL
Bioinformatics; 2007 Dec; 23(24):3382-3. PubMed ID: 17977882
[TBL] [Abstract][Full Text] [Related]
9. F2CS: FSSP to CATH and SCOP prediction server.
Getz G; Starovolsky A; Domany E
Bioinformatics; 2004 Sep; 20(13):2150-2. PubMed ID: 15059833
[TBL] [Abstract][Full Text] [Related]
10. SubLoc: a server/client suite for protein subcellular location based on SOAP.
Chen H; Huang N; Sun Z
Bioinformatics; 2006 Feb; 22(3):376-7. PubMed ID: 16339283
[TBL] [Abstract][Full Text] [Related]
11. Finding homologs in amino acid sequences using network BLAST searches.
Ladunga I
Curr Protoc Bioinformatics; 2003 Feb; Chapter 3():Unit 3.4. PubMed ID: 18428697
[TBL] [Abstract][Full Text] [Related]
12. Large-scale database searching using tandem mass spectra: looking up the answer in the back of the book.
Sadygov RG; Cociorva D; Yates JR
Nat Methods; 2004 Dec; 1(3):195-202. PubMed ID: 15789030
[TBL] [Abstract][Full Text] [Related]
13. TandTRAQ: an open-source tool for integrated protein identification and quantitation.
Laderas T; Bystrom C; McMillen D; Fan G; McWeeney S
Bioinformatics; 2007 Dec; 23(24):3394-6. PubMed ID: 17895273
[TBL] [Abstract][Full Text] [Related]
14. STORM towards protein function: systematic tailored ORF-data retrieval and management.
Lavigne R; Sun WD; Volckaert G
Appl Bioinformatics; 2003; 2(3):177-9. PubMed ID: 15130805
[TBL] [Abstract][Full Text] [Related]
15. Mathematically complete nucleotide and protein sequence searching using Ssearch.
Ropelewski AJ; Nicholas HB; Deerfield DW
Curr Protoc Bioinformatics; 2004 Feb; Chapter 3():Unit3.10. PubMed ID: 18428720
[TBL] [Abstract][Full Text] [Related]
16. Searching sequence databases via de novo peptide sequencing by tandem mass spectrometry.
Johnson RS; Taylor JA
Mol Biotechnol; 2002 Nov; 22(3):301-15. PubMed ID: 12448884
[TBL] [Abstract][Full Text] [Related]
17. One-Block CYRCA: an automated procedure for identifying multiple-block alignments from single block queries.
Frenkel-Morgenstern M; Singer A; Bronfeld H; Pietrokovski S
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W281-3. PubMed ID: 15980470
[TBL] [Abstract][Full Text] [Related]
18. Using Dali for structural comparison of proteins.
Holm L; Kääriäinen S; Wilton C; Plewczynski D
Curr Protoc Bioinformatics; 2006 Jul; Chapter 5():Unit 5.5. PubMed ID: 18428766
[TBL] [Abstract][Full Text] [Related]
19. DBToolkit: processing protein databases for peptide-centric proteomics.
Martens L; Vandekerckhove J; Gevaert K
Bioinformatics; 2005 Sep; 21(17):3584-5. PubMed ID: 16030071
[TBL] [Abstract][Full Text] [Related]
20. Adding some SPICE to DAS.
Prlić A; Down TA; Hubbard TJ
Bioinformatics; 2005 Sep; 21 Suppl 2(Suppl 2):ii40-1. PubMed ID: 16204122
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]