These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

191 related articles for article (PubMed ID: 29036591)

  • 21. CSAR: a contig scaffolding tool using algebraic rearrangements.
    Chen KT; Liu CL; Huang SH; Shen HT; Shieh YK; Chiu HT; Lu CL
    Bioinformatics; 2018 Jan; 34(1):109-111. PubMed ID: 28968788
    [TBL] [Abstract][Full Text] [Related]  

  • 22. GraphPlas: Refined Classification of Plasmid Sequences Using Assembly Graphs.
    Wickramarachchi A; Lin Y
    IEEE/ACM Trans Comput Biol Bioinform; 2022; 19(1):57-67. PubMed ID: 34029192
    [TBL] [Abstract][Full Text] [Related]  

  • 23. PlasForest: a homology-based random forest classifier for plasmid detection in genomic datasets.
    Pradier L; Tissot T; Fiston-Lavier AS; Bedhomme S
    BMC Bioinformatics; 2021 Jun; 22(1):349. PubMed ID: 34174810
    [TBL] [Abstract][Full Text] [Related]  

  • 24. AlignGraph: algorithm for secondary de novo genome assembly guided by closely related references.
    Bao E; Jiang T; Girke T
    Bioinformatics; 2014 Jun; 30(12):i319-i328. PubMed ID: 24932000
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Kerfuffle: a web tool for multi-species gene colocalization analysis.
    Aboukhalil R; Fendler B; Atwal GS
    BMC Bioinformatics; 2013 Jan; 14():22. PubMed ID: 23327649
    [TBL] [Abstract][Full Text] [Related]  

  • 26. MoDMaps3D: an interactive webtool for the quantification and 3D visualization of interrelationships in a dataset of DNA sequences.
    Karamichalis R; Kari L
    Bioinformatics; 2017 Oct; 33(19):3091-3093. PubMed ID: 28605460
    [TBL] [Abstract][Full Text] [Related]  

  • 27. WebACT--an online companion for the Artemis Comparison Tool.
    Abbott JC; Aanensen DM; Rutherford K; Butcher S; Spratt BG
    Bioinformatics; 2005 Sep; 21(18):3665-6. PubMed ID: 16076890
    [TBL] [Abstract][Full Text] [Related]  

  • 28. DraGnET: software for storing, managing and analyzing annotated draft genome sequence data.
    Duncan S; Sirkanungo R; Miller L; Phillips GJ
    BMC Bioinformatics; 2010 Feb; 11():100. PubMed ID: 20175920
    [TBL] [Abstract][Full Text] [Related]  

  • 29. BOV--a web-based BLAST output visualization tool.
    Gollapudi R; Revanna KV; Hemmerich C; Schaack S; Dong Q
    BMC Genomics; 2008 Sep; 9():414. PubMed ID: 18793422
    [TBL] [Abstract][Full Text] [Related]  

  • 30. A space and time-efficient index for the compacted colored de Bruijn graph.
    Almodaresi F; Sarkar H; Srivastava A; Patro R
    Bioinformatics; 2018 Jul; 34(13):i169-i177. PubMed ID: 29949982
    [TBL] [Abstract][Full Text] [Related]  

  • 31. COCACOLA: binning metagenomic contigs using sequence COmposition, read CoverAge, CO-alignment and paired-end read LinkAge.
    Lu YY; Chen T; Fuhrman JA; Sun F
    Bioinformatics; 2017 Mar; 33(6):791-798. PubMed ID: 27256312
    [TBL] [Abstract][Full Text] [Related]  

  • 32. BLAST-XYPlot Viewer: A Tool for Performing BLAST in Whole-Genome Sequenced Bacteria/Archaea and Visualize Whole Results Simultaneously.
    Pedraza-Pérez Y; Cuevas-Vede RA; Canto-Gómez ÁB; López-Pliego L; Gutiérrez-Ríos RM; Hernández-Lucas I; Rubín-Linares G; Martínez-Laguna Y; López-Olguín JF; Fuentes-Ramírez LE
    G3 (Bethesda); 2018 Jul; 8(7):2167-2172. PubMed ID: 29789313
    [TBL] [Abstract][Full Text] [Related]  

  • 33. ContigScape: a Cytoscape plugin facilitating microbial genome gap closing.
    Tang B; Wang Q; Yang M; Xie F; Zhu Y; Zhuo Y; Wang S; Gao H; Ding X; Zhang L; Zhao G; Zheng H
    BMC Genomics; 2013 Apr; 14():289. PubMed ID: 23627759
    [TBL] [Abstract][Full Text] [Related]  

  • 34. ISEScan: automated identification of insertion sequence elements in prokaryotic genomes.
    Xie Z; Tang H
    Bioinformatics; 2017 Nov; 33(21):3340-3347. PubMed ID: 29077810
    [TBL] [Abstract][Full Text] [Related]  

  • 35. GEnView: a gene-centric, phylogeny-based comparative genomics pipeline for bacterial genomes and plasmids.
    Ebmeyer S; Coertze RD; Berglund F; Kristiansson E; Larsson DGJ
    Bioinformatics; 2022 Mar; 38(6):1727-1728. PubMed ID: 34951622
    [TBL] [Abstract][Full Text] [Related]  

  • 36. BPhyOG: an interactive server for genome-wide inference of bacterial phylogenies based on overlapping genes.
    Luo Y; Fu C; Zhang DY; Lin K
    BMC Bioinformatics; 2007 Jul; 8():266. PubMed ID: 17650344
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Kaptive Web: User-Friendly Capsule and Lipopolysaccharide Serotype Prediction for Klebsiella Genomes.
    Wick RR; Heinz E; Holt KE; Wyres KL
    J Clin Microbiol; 2018 Jun; 56(6):. PubMed ID: 29618504
    [TBL] [Abstract][Full Text] [Related]  

  • 38. AGORA: organellar genome annotation from the amino acid and nucleotide references.
    Jung J; Kim JI; Jeong YS; Yi G
    Bioinformatics; 2018 Aug; 34(15):2661-2663. PubMed ID: 29617954
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Tracking of Antibiotic Resistance Transfer and Rapid Plasmid Evolution in a Hospital Setting by Nanopore Sequencing.
    Peter S; Bosio M; Gross C; Bezdan D; Gutierrez J; Oberhettinger P; Liese J; Vogel W; Dörfel D; Berger L; Marschal M; Willmann M; Gut I; Gut M; Autenrieth I; Ossowski S
    mSphere; 2020 Aug; 5(4):. PubMed ID: 32817379
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Simple, Reliable, and Time-Efficient Manual Annotation of Bacterial Genomes with MAISEN.
    Dziurzynski M; Decewicz P; Ciuchcinski K; Gorecki A; Dziewit L
    Methods Mol Biol; 2021; 2242():221-229. PubMed ID: 33961227
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 10.