BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

93 related articles for article (PubMed ID: 29050852)

  • 1. Coop-Seq Analysis Demonstrates that Sox2 Evokes Latent Specificities in the DNA Recognition by Pax6.
    Hu C; Malik V; Chang YK; Veerapandian V; Srivastava Y; Huang YH; Hou L; Cojocaru V; Stormo GD; Jauch R
    J Mol Biol; 2017 Nov; 429(23):3626-3634. PubMed ID: 29050852
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Examining cooperative binding of Sox2 on DC5 regulatory element upon complex formation with Pax6 through excess electron transfer assay.
    Saha A; Kizaki S; De D; Endo M; Kim KK; Sugiyama H
    Nucleic Acids Res; 2016 Aug; 44(14):e125. PubMed ID: 27229137
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Quantitative profiling of selective Sox/POU pairing on hundreds of sequences in parallel by Coop-seq.
    Chang YK; Srivastava Y; Hu C; Joyce A; Yang X; Zuo Z; Havranek JJ; Stormo GD; Jauch R
    Nucleic Acids Res; 2017 Jan; 45(2):832-845. PubMed ID: 27915232
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Nano-analysis of DNA conformation changes induced by transcription factor complex binding using plasmonic nanodimers.
    Morimura H; Tanaka S; Ishitobi H; Mikami T; Kamachi Y; Kondoh H; Inouye Y
    ACS Nano; 2013 Dec; 7(12):10733-40. PubMed ID: 24195575
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Interplay of Pax6 and SOX2 in lens development as a paradigm of genetic switch mechanisms for cell differentiation.
    Kondoh H; Uchikawa M; Kamachi Y
    Int J Dev Biol; 2004; 48(8-9):819-27. PubMed ID: 15558474
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Pax6 and SOX2 form a co-DNA-binding partner complex that regulates initiation of lens development.
    Kamachi Y; Uchikawa M; Tanouchi A; Sekido R; Kondoh H
    Genes Dev; 2001 May; 15(10):1272-86. PubMed ID: 11358870
    [TBL] [Abstract][Full Text] [Related]  

  • 7. DNA-mediated cooperativity facilitates the co-selection of cryptic enhancer sequences by SOX2 and PAX6 transcription factors.
    Narasimhan K; Pillay S; Huang YH; Jayabal S; Udayasuryan B; Veerapandian V; Kolatkar P; Cojocaru V; Pervushin K; Jauch R
    Nucleic Acids Res; 2015 Feb; 43(3):1513-28. PubMed ID: 25578969
    [TBL] [Abstract][Full Text] [Related]  

  • 8. PAX6 and SOX2-dependent regulation of the Sox2 enhancer N-3 involved in embryonic visual system development.
    Inoue M; Kamachi Y; Matsunami H; Imada K; Uchikawa M; Kondoh H
    Genes Cells; 2007 Sep; 12(9):1049-61. PubMed ID: 17825048
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Epigenetically regulated PAX6 drives cancer cells toward a stem-like state via GLI-SOX2 signaling axis in lung adenocarcinoma.
    Ooki A; Dinalankara W; Marchionni L; Tsay JJ; Goparaju C; Maleki Z; Rom WN; Pass HI; Hoque MO
    Oncogene; 2018 Nov; 37(45):5967-5981. PubMed ID: 29980786
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Cooperative DNA Recognition Modulated by an Interplay between Protein-Protein Interactions and DNA-Mediated Allostery.
    Merino F; Bouvier B; Cojocaru V
    PLoS Comput Biol; 2015 Jun; 11(6):e1004287. PubMed ID: 26067358
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Sox2 and Pax6 Play Counteracting Roles in Regulating Neurogenesis within the Murine Olfactory Epithelium.
    Packard AI; Lin B; Schwob JE
    PLoS One; 2016; 11(5):e0155167. PubMed ID: 27171428
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Differential Nucleosome Occupancies across Oct4-Sox2 Binding Sites in Murine Embryonic Stem Cells.
    Sebeson A; Xi L; Zhang Q; Sigmund A; Wang JP; Widom J; Wang X
    PLoS One; 2015; 10(5):e0127214. PubMed ID: 25992972
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Co-motif discovery identifies an Esrrb-Sox2-DNA ternary complex as a mediator of transcriptional differences between mouse embryonic and epiblast stem cells.
    Hutchins AP; Choo SH; Mistri TK; Rahmani M; Woon CT; Ng CK; Jauch R; Robson P
    Stem Cells; 2013 Feb; 31(2):269-81. PubMed ID: 23169531
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Single molecule visualization and characterization of Sox2-Pax6 complex formation on a regulatory DNA element using a DNA origami frame.
    Yamamoto S; De D; Hidaka K; Kim KK; Endo M; Sugiyama H
    Nano Lett; 2014 May; 14(5):2286-92. PubMed ID: 24660747
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Identification of highly conserved putative developmental enhancers bound by SOX3 in neural progenitors using ChIP-Seq.
    McAninch D; Thomas P
    PLoS One; 2014; 9(11):e113361. PubMed ID: 25409526
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Molecular basis for synergistic transcriptional activation by Oct1 and Sox2 revealed from the solution structure of the 42-kDa Oct1.Sox2.Hoxb1-DNA ternary transcription factor complex.
    Williams DC; Cai M; Clore GM
    J Biol Chem; 2004 Jan; 279(2):1449-57. PubMed ID: 14559893
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Interplay between minor and major groove-binding transcription factors Sox2 and Oct1 in translocation on DNA studied by paramagnetic and diamagnetic NMR.
    Takayama Y; Clore GM
    J Biol Chem; 2012 Apr; 287(18):14349-63. PubMed ID: 22396547
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Regulation of gene expression by Pax6 in ocular cells: a case of tissue-preferred expression of crystallins in lens.
    Cvekl A; Yang Y; Chauhan BK; Cveklova K
    Int J Dev Biol; 2004; 48(8-9):829-44. PubMed ID: 15558475
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Pax6 directly modulate Sox2 expression in the neural progenitor cells.
    Wen J; Hu Q; Li M; Wang S; Zhang L; Chen Y; Li L
    Neuroreport; 2008 Mar; 19(4):413-7. PubMed ID: 18287938
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Identification of in vivo DNA-binding mechanisms of Pax6 and reconstruction of Pax6-dependent gene regulatory networks during forebrain and lens development.
    Sun J; Rockowitz S; Xie Q; Ashery-Padan R; Zheng D; Cvekl A
    Nucleic Acids Res; 2015 Aug; 43(14):6827-46. PubMed ID: 26138486
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 5.