These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
235 related articles for article (PubMed ID: 29051622)
1. Genome-Guided Phylo-Transcriptomic Methods and the Nuclear Phylogentic Tree of the Paniceae Grasses. Washburn JD; Schnable JC; Conant GC; Brutnell TP; Shao Y; Zhang Y; Ludwig M; Davidse G; Pires JC Sci Rep; 2017 Oct; 7(1):13528. PubMed ID: 29051622 [TBL] [Abstract][Full Text] [Related]
2. Comparative transcriptomics of three Poaceae species reveals patterns of gene expression evolution. Davidson RM; Gowda M; Moghe G; Lin H; Vaillancourt B; Shiu SH; Jiang N; Robin Buell C Plant J; 2012 Aug; 71(3):492-502. PubMed ID: 22443345 [TBL] [Abstract][Full Text] [Related]
3. Phylogeny and photosynthesis of the grass tribe Paniceae. Washburn JD; Schnable JC; Davidse G; Pires JC Am J Bot; 2015 Sep; 102(9):1493-505. PubMed ID: 26373976 [TBL] [Abstract][Full Text] [Related]
4. Orthology inference in nonmodel organisms using transcriptomes and low-coverage genomes: improving accuracy and matrix occupancy for phylogenomics. Yang Y; Smith SA Mol Biol Evol; 2014 Nov; 31(11):3081-92. PubMed ID: 25158799 [TBL] [Abstract][Full Text] [Related]
5. Leaf transcriptome of two highly divergent genotypes of Urochloa humidicola (Poaceae), a tropical polyploid forage grass adapted to acidic soils and temporary flooding areas. Vigna BB; de Oliveira FA; de Toledo-Silva G; da Silva CC; do Valle CB; de Souza AP BMC Genomics; 2016 Nov; 17(1):910. PubMed ID: 27835957 [TBL] [Abstract][Full Text] [Related]
6. Assessment of phylogenomic and orthology approaches for phylogenetic inference. Dutilh BE; van Noort V; van der Heijden RT; Boekhout T; Snel B; Huynen MA Bioinformatics; 2007 Apr; 23(7):815-24. PubMed ID: 17237036 [TBL] [Abstract][Full Text] [Related]
7. Chloroplast phylogenomic analyses resolve deep-level relationships of an intractable bamboo tribe Arundinarieae (poaceae). Ma PF; Zhang YX; Zeng CX; Guo ZH; Li DZ Syst Biol; 2014 Nov; 63(6):933-50. PubMed ID: 25092479 [TBL] [Abstract][Full Text] [Related]
8. Evolutionary genomics of C4 photosynthesis in grasses requires a large species sampling. Besnard G; Christin PA C R Biol; 2010 Aug; 333(8):577-81. PubMed ID: 20688277 [TBL] [Abstract][Full Text] [Related]
10. A Phylogenomic Assessment of Ancient Polyploidy and Genome Evolution across the Poales. McKain MR; Tang H; McNeal JR; Ayyampalayam S; Davis JI; dePamphilis CW; Givnish TJ; Pires JC; Stevenson DW; Leebens-Mack JH Genome Biol Evol; 2016 Apr; 8(4):1150-64. PubMed ID: 26988252 [TBL] [Abstract][Full Text] [Related]
11. From cacti to carnivores: Improved phylotranscriptomic sampling and hierarchical homology inference provide further insight into the evolution of Caryophyllales. Walker JF; Yang Y; Feng T; Timoneda A; Mikenas J; Hutchison V; Edwards C; Wang N; Ahluwalia S; Olivieri J; Walker-Hale N; Majure LC; Puente R; Kadereit G; Lauterbach M; Eggli U; Flores-Olvera H; Ochoterena H; Brockington SF; Moore MJ; Smith SA Am J Bot; 2018 Mar; 105(3):446-462. PubMed ID: 29738076 [TBL] [Abstract][Full Text] [Related]
12. Grass evolution inferred from chromosomal rearrangements and geometrical and statistical features in RNA structure. Caetano-Anollés G J Mol Evol; 2005 May; 60(5):635-52. PubMed ID: 15983872 [TBL] [Abstract][Full Text] [Related]
13. Genome-wide RAD sequencing data provide unprecedented resolution of the phylogeny of temperate bamboos (Poaceae: Bambusoideae). Wang X; Ye X; Zhao L; Li D; Guo Z; Zhuang H Sci Rep; 2017 Sep; 7(1):11546. PubMed ID: 28912480 [TBL] [Abstract][Full Text] [Related]
14. Multilocus phylogeny and phylogenomics of Eriochrysis P. Beauv. (Poaceae-Andropogoneae): Taxonomic implications and evidence of interspecific hybridization. Welker CAD; Souza-Chies TT; Longhi-Wagner HM; Peichoto MC; McKain MR; Kellogg EA Mol Phylogenet Evol; 2016 Jun; 99():155-167. PubMed ID: 26947710 [TBL] [Abstract][Full Text] [Related]
15. Computational methods for Gene Orthology inference. Kristensen DM; Wolf YI; Mushegian AR; Koonin EV Brief Bioinform; 2011 Sep; 12(5):379-91. PubMed ID: 21690100 [TBL] [Abstract][Full Text] [Related]
16. Author Correction: Genome-Guided Phylo-Transcriptomic Methods and the Nuclear Phylogenetic Tree of the Paniceae Grasses. Washburn JD; Schnable JC; Conant GC; Brutnell TP; Shao Y; Zhang Y; Ludwig M; Davidse G; Pires JC Sci Rep; 2018 May; 8(1):7120. PubMed ID: 29720618 [TBL] [Abstract][Full Text] [Related]
17. Dissecting Molecular Evolution in the Highly Diverse Plant Clade Caryophyllales Using Transcriptome Sequencing. Yang Y; Moore MJ; Brockington SF; Soltis DE; Wong GK; Carpenter EJ; Zhang Y; Chen L; Yan Z; Xie Y; Sage RF; Covshoff S; Hibberd JM; Nelson MN; Smith SA Mol Biol Evol; 2015 Aug; 32(8):2001-14. PubMed ID: 25837578 [TBL] [Abstract][Full Text] [Related]
18. Quality and quantity of data recovered from massively parallel sequencing: Examples in Asparagales and Poaceae. Steele PR; Hertweck KL; Mayfield D; McKain MR; Leebens-Mack J; Pires JC Am J Bot; 2012 Feb; 99(2):330-48. PubMed ID: 22291168 [TBL] [Abstract][Full Text] [Related]
19. PhyloTreePruner: A Phylogenetic Tree-Based Approach for Selection of Orthologous Sequences for Phylogenomics. Kocot KM; Citarella MR; Moroz LL; Halanych KM Evol Bioinform Online; 2013; 9():429-35. PubMed ID: 24250218 [TBL] [Abstract][Full Text] [Related]
20. Testing efficacy of distance and tree-based methods for DNA barcoding of grasses (Poaceae tribe Poeae) in Australia. Birch JL; Walsh NG; Cantrill DJ; Holmes GD; Murphy DJ PLoS One; 2017; 12(10):e0186259. PubMed ID: 29084279 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]