133 related articles for article (PubMed ID: 29072073)
1. Sequence-Based Prediction of Cysteine Reactivity Using Machine Learning.
Wang H; Chen X; Li C; Liu Y; Yang F; Wang C
Biochemistry; 2018 Jan; 57(4):451-460. PubMed ID: 29072073
[TBL] [Abstract][Full Text] [Related]
2. Prediction of redox-sensitive cysteines using sequential distance and other sequence-based features.
Sun MA; Zhang Q; Wang Y; Ge W; Guo D
BMC Bioinformatics; 2016 Aug; 17(1):316. PubMed ID: 27553667
[TBL] [Abstract][Full Text] [Related]
3. Quantitative reactivity profiling predicts functional cysteines in proteomes.
Weerapana E; Wang C; Simon GM; Richter F; Khare S; Dillon MB; Bachovchin DA; Mowen K; Baker D; Cravatt BF
Nature; 2010 Dec; 468(7325):790-5. PubMed ID: 21085121
[TBL] [Abstract][Full Text] [Related]
4. Identifying cysteines and histidines in transition-metal-binding sites using support vector machines and neural networks.
Passerini A; Punta M; Ceroni A; Rost B; Frasconi P
Proteins; 2006 Nov; 65(2):305-16. PubMed ID: 16927295
[TBL] [Abstract][Full Text] [Related]
5. HyperCys: A Structure- and Sequence-Based Predictor of Hyper-Reactive Druggable Cysteines.
Gao M; Günther S
Int J Mol Sci; 2023 Mar; 24(6):. PubMed ID: 36983037
[TBL] [Abstract][Full Text] [Related]
6. The disulfide proteome and other reactive cysteine proteomes: analysis and functional significance.
Lindahl M; Mata-Cabana A; Kieselbach T
Antioxid Redox Signal; 2011 Jun; 14(12):2581-642. PubMed ID: 21275844
[TBL] [Abstract][Full Text] [Related]
7. A competitive chemical-proteomic platform to identify zinc-binding cysteines.
Pace NJ; Weerapana E
ACS Chem Biol; 2014 Jan; 9(1):258-65. PubMed ID: 24111988
[TBL] [Abstract][Full Text] [Related]
8. Quantitative redox proteomics: the NOxICAT method.
Lindemann C; Leichert LI
Methods Mol Biol; 2012; 893():387-403. PubMed ID: 22665313
[TBL] [Abstract][Full Text] [Related]
9. Isotopically-Labeled Iodoacetamide-Alkyne Probes for Quantitative Cysteine-Reactivity Profiling.
Abo M; Li C; Weerapana E
Mol Pharm; 2018 Mar; 15(3):743-749. PubMed ID: 29172527
[TBL] [Abstract][Full Text] [Related]
10. Applications of Reactive Cysteine Profiling.
Backus KM
Curr Top Microbiol Immunol; 2019; 420():375-417. PubMed ID: 30105421
[TBL] [Abstract][Full Text] [Related]
11. Prediction of the bonding states of cysteines using the support vector machines based on multiple feature vectors and cysteine state sequences.
Chen YC; Lin YS; Lin CJ; Hwang JK
Proteins; 2004 Jun; 55(4):1036-42. PubMed ID: 15146500
[TBL] [Abstract][Full Text] [Related]
12. UbiSite: incorporating two-layered machine learning method with substrate motifs to predict ubiquitin-conjugation site on lysines.
Huang CH; Su MG; Kao HJ; Jhong JH; Weng SL; Lee TY
BMC Syst Biol; 2016 Jan; 10 Suppl 1(Suppl 1):6. PubMed ID: 26818456
[TBL] [Abstract][Full Text] [Related]
13. Identifying Functional Cysteine Residues in the Mitochondria.
Bak DW; Pizzagalli MD; Weerapana E
ACS Chem Biol; 2017 Apr; 12(4):947-957. PubMed ID: 28157297
[TBL] [Abstract][Full Text] [Related]
14. Systematic and Quantitative Assessment of Hydrogen Peroxide Reactivity With Cysteines Across Human Proteomes.
Fu L; Liu K; Sun M; Tian C; Sun R; Morales Betanzos C; Tallman KA; Porter NA; Yang Y; Guo D; Liebler DC; Yang J
Mol Cell Proteomics; 2017 Oct; 16(10):1815-1828. PubMed ID: 28827280
[TBL] [Abstract][Full Text] [Related]
15. Prediction and analysis of redox-sensitive cysteines using machine learning and statistical methods.
Keßler M; Wittig I; Ackermann J; Koch I
Biol Chem; 2021 Jul; 402(8):925-935. PubMed ID: 34261205
[TBL] [Abstract][Full Text] [Related]
16. Interrogation of Functional Mitochondrial Cysteine Residues by Quantitative Mass Spectrometry.
Bak DW; Weerapana E
Methods Mol Biol; 2019; 1967():211-227. PubMed ID: 31069773
[TBL] [Abstract][Full Text] [Related]
17. Cy-preds: An algorithm and a web service for the analysis and prediction of cysteine reactivity.
Soylu İ; Marino SM
Proteins; 2016 Feb; 84(2):278-91. PubMed ID: 26685111
[TBL] [Abstract][Full Text] [Related]
18. The extreme hyper-reactivity of selected cysteines drives hierarchical disulfide bond formation in serum albumin.
Bocedi A; Fabrini R; Pedersen JZ; Federici G; Iavarone F; Martelli C; Castagnola M; Ricci G
FEBS J; 2016 Nov; 283(22):4113-4127. PubMed ID: 27685835
[TBL] [Abstract][Full Text] [Related]
19. Proteome-Wide Profiling of Targets of Cysteine reactive Small Molecules by Using Ethynyl Benziodoxolone Reagents.
Abegg D; Frei R; Cerato L; Prasad Hari D; Wang C; Waser J; Adibekian A
Angew Chem Int Ed Engl; 2015 Sep; 54(37):10852-7. PubMed ID: 26211368
[TBL] [Abstract][Full Text] [Related]
20. Sulfhydryl-specific probe for monitoring protein redox sensitivity.
Lee JJ; Ha S; Kim HJ; Ha HJ; Lee HY; Lee KJ
ACS Chem Biol; 2014 Dec; 9(12):2883-94. PubMed ID: 25354229
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
