195 related articles for article (PubMed ID: 29077807)
1. pqsfinder: an exhaustive and imperfection-tolerant search tool for potential quadruplex-forming sequences in R.
Hon J; Martínek T; Zendulka J; Lexa M
Bioinformatics; 2017 Nov; 33(21):3373-3379. PubMed ID: 29077807
[TBL] [Abstract][Full Text] [Related]
2. pqsfinder web: G-quadruplex prediction using optimized pqsfinder algorithm.
Labudová D; Hon J; Lexa M
Bioinformatics; 2020 Apr; 36(8):2584-2586. PubMed ID: 31830256
[TBL] [Abstract][Full Text] [Related]
3. G4Killer web application: a tool to design G-quadruplex mutations.
Brazda V; Kolomaznik J; Mergny JL; Stastny J
Bioinformatics; 2020 May; 36(10):3246-3247. PubMed ID: 31985802
[TBL] [Abstract][Full Text] [Related]
4. Triplex: an R/Bioconductor package for identification and visualization of potential intramolecular triplex patterns in DNA sequences.
Hon J; Martínek T; Rajdl K; Lexa M
Bioinformatics; 2013 Aug; 29(15):1900-1. PubMed ID: 23709494
[TBL] [Abstract][Full Text] [Related]
5. G4Hunter web application: a web server for G-quadruplex prediction.
Brázda V; Kolomazník J; Lýsek J; Bartas M; Fojta M; Šťastný J; Mergny JL
Bioinformatics; 2019 Sep; 35(18):3493-3495. PubMed ID: 30721922
[TBL] [Abstract][Full Text] [Related]
6. Re-evaluation of G-quadruplex propensity with G4Hunter.
Bedrat A; Lacroix L; Mergny JL
Nucleic Acids Res; 2016 Feb; 44(4):1746-59. PubMed ID: 26792894
[TBL] [Abstract][Full Text] [Related]
7. How bioinformatics resources work with G4 RNAs.
Miskiewicz J; Sarzynska J; Szachniuk M
Brief Bioinform; 2021 May; 22(3):. PubMed ID: 32898859
[TBL] [Abstract][Full Text] [Related]
8. G-Quadruplexes in the Archaea Domain.
Brázda V; Luo Y; Bartas M; Kaura P; Porubiaková O; Šťastný J; Pečinka P; Verga D; Da Cunha V; Takahashi TS; Forterre P; Myllykallio H; Fojta M; Mergny JL
Biomolecules; 2020 Sep; 10(9):. PubMed ID: 32967357
[TBL] [Abstract][Full Text] [Related]
9. Characterization of DNA G-Quadruplex Structures in Human Immunoglobulin Heavy Variable (IGHV) Genes.
Tang C; MacCarthy T
Front Immunol; 2021; 12():671944. PubMed ID: 34040612
[TBL] [Abstract][Full Text] [Related]
10. QGRS Mapper: a web-based server for predicting G-quadruplexes in nucleotide sequences.
Kikin O; D'Antonio L; Bagga PS
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W676-82. PubMed ID: 16845096
[TBL] [Abstract][Full Text] [Related]
11. QPARSE: searching for long-looped or multimeric G-quadruplexes potentially distinctive and druggable.
Berselli M; Lavezzo E; Toppo S
Bioinformatics; 2020 Jan; 36(2):393-399. PubMed ID: 31328780
[TBL] [Abstract][Full Text] [Related]
12. A dynamic programming algorithm for identification of triplex-forming sequences.
Lexa M; Martínek T; Burgetová I; Kopeček D; Brázdová M
Bioinformatics; 2011 Sep; 27(18):2510-7. PubMed ID: 21791534
[TBL] [Abstract][Full Text] [Related]
13. DNA-unwinding activity of
Wang L; Wang QM; Wang YR; Xi XG; Hou XM
J Biol Chem; 2018 Nov; 293(48):18504-18513. PubMed ID: 30305390
[TBL] [Abstract][Full Text] [Related]
14. G4RNA: an RNA G-quadruplex database.
Garant JM; Luce MJ; Scott MS; Perreault JP
Database (Oxford); 2015 Jun; 2015():bav059. PubMed ID: 26200754
[TBL] [Abstract][Full Text] [Related]
15. The G-quadruplex (G4) resolvase DHX36 efficiently and specifically disrupts DNA G4s via a translocation-based helicase mechanism.
Yangyuoru PM; Bradburn DA; Liu Z; Xiao TS; Russell R
J Biol Chem; 2018 Feb; 293(6):1924-1932. PubMed ID: 29269411
[TBL] [Abstract][Full Text] [Related]
16. DeepG4: A deep learning approach to predict cell-type specific active G-quadruplex regions.
Rocher V; Genais M; Nassereddine E; Mourad R
PLoS Comput Biol; 2021 Aug; 17(8):e1009308. PubMed ID: 34383754
[TBL] [Abstract][Full Text] [Related]
17. A Novel G-Quadruplex Binding Protein in Yeast-Slx9.
Götz S; Pandey S; Bartsch S; Juranek S; Paeschke K
Molecules; 2019 May; 24(9):. PubMed ID: 31067825
[TBL] [Abstract][Full Text] [Related]
18. G4mismatch: Deep neural networks to predict G-quadruplex propensity based on G4-seq data.
Barshai M; Engel B; Haim I; Orenstein Y
PLoS Comput Biol; 2023 Mar; 19(3):e1010948. PubMed ID: 36897885
[TBL] [Abstract][Full Text] [Related]
19. Prevalence of quadruplexes in the human genome.
Huppert JL; Balasubramanian S
Nucleic Acids Res; 2005; 33(9):2908-16. PubMed ID: 15914667
[TBL] [Abstract][Full Text] [Related]
20. G-Quadruplex Formation by DNA Sequences Deficient in Guanines: Two Tetrad Parallel Quadruplexes Do Not Fold Intramolecularly.
Kejnovská I; Stadlbauer P; Trantírek L; Renčiuk D; Gajarský M; Krafčík D; Palacký J; Bednářová K; Šponer J; Mergny JL; Vorlíčková M
Chemistry; 2021 Aug; 27(47):12115-12125. PubMed ID: 34145655
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]