158 related articles for article (PubMed ID: 29085906)
1. ABLE: An Activity-Based Level Set Segmentation Algorithm for Two-Photon Calcium Imaging Data.
Reynolds S; Abrahamsson T; Schuck R; Sjöström PJ; Schultz SR; Dragotti PL
eNeuro; 2017; 4(5):. PubMed ID: 29085906
[TBL] [Abstract][Full Text] [Related]
2. A generalised method to estimate the kinetics of fast Ca(2+) currents from Ca(2+) imaging experiments.
Ait Ouares K; Jaafari N; Canepari M
J Neurosci Methods; 2016 Aug; 268():66-77. PubMed ID: 27163479
[TBL] [Abstract][Full Text] [Related]
3. Bayesian methods for event analysis of intracellular currents.
Merel J; Shababo B; Naka A; Adesnik H; Paninski L
J Neurosci Methods; 2016 Aug; 269():21-32. PubMed ID: 27208694
[TBL] [Abstract][Full Text] [Related]
4. Localized Patch-Based Fuzzy Active Contours for Image Segmentation.
Fang J; Liu H; Liu H; Zhang L; Liu J
Comput Math Methods Med; 2016; 2016():1064692. PubMed ID: 28070210
[TBL] [Abstract][Full Text] [Related]
5. NoRMCorre: An online algorithm for piecewise rigid motion correction of calcium imaging data.
Pnevmatikakis EA; Giovannucci A
J Neurosci Methods; 2017 Nov; 291():83-94. PubMed ID: 28782629
[TBL] [Abstract][Full Text] [Related]
6. Optimising adjacent membrane segmentation and parameterisation in multicellular aggregates by piecewise active contours.
Jara-Wilde J; Castro I; Lemus CG; Palma K; Valdés F; Castañeda V; Hitschfeld N; Concha ML; Härtel S
J Microsc; 2020 May; 278(2):59-75. PubMed ID: 32141623
[TBL] [Abstract][Full Text] [Related]
7. Integration of autopatching with automated pipette and cell detection in vitro.
Wu 吴秋雨 Q; Kolb I; Callahan BM; Su Z; Stoy W; Kodandaramaiah SB; Neve R; Zeng H; Boyden ES; Forest CR; Chubykin AA
J Neurophysiol; 2016 Oct; 116(4):1564-1578. PubMed ID: 27385800
[TBL] [Abstract][Full Text] [Related]
8. Extracting neuronal activity signals from microscopy recordings of contractile tissue using B-spline Explicit Active Surfaces (BEAS) cell tracking.
Kazwiny Y; Pedrosa J; Zhang Z; Boesmans W; D'hooge J; Vanden Berghe P
Sci Rep; 2021 May; 11(1):10937. PubMed ID: 34035411
[TBL] [Abstract][Full Text] [Related]
9. Segmentation and Quantitative Analysis of Apoptosis of Chinese Hamster Ovary Cells from Fluorescence Microscopy Images.
Du Y; Budman HM; Duever TA
Microsc Microanal; 2017 Jun; 23(3):569-583. PubMed ID: 28367787
[TBL] [Abstract][Full Text] [Related]
10. Active mask segmentation of fluorescence microscope images.
Srinivasa G; Fickus MC; Guo Y; Linstedt AD; Kovacević J
IEEE Trans Image Process; 2009 Aug; 18(8):1817-29. PubMed ID: 19380268
[TBL] [Abstract][Full Text] [Related]
11. Active Contours Using Additive Local and Global Intensity Fitting Models for Intensity Inhomogeneous Image Segmentation.
Soomro S; Akram F; Kim JH; Soomro TA; Choi KN
Comput Math Methods Med; 2016; 2016():9675249. PubMed ID: 27800011
[TBL] [Abstract][Full Text] [Related]
12. Fast online deconvolution of calcium imaging data.
Friedrich J; Zhou P; Paninski L
PLoS Comput Biol; 2017 Mar; 13(3):e1005423. PubMed ID: 28291787
[TBL] [Abstract][Full Text] [Related]
13. A hybrid level set model for image segmentation.
Chen W; Liu C; Basu A; Pan B
PLoS One; 2021; 16(6):e0251914. PubMed ID: 34097693
[TBL] [Abstract][Full Text] [Related]
14. Optimized temporally deconvolved Ca²⁺ imaging allows identification of spatiotemporal activity patterns of CA1 hippocampal ensembles.
Pfeiffer T; Draguhn A; Reichinnek S; Both M
Neuroimage; 2014 Jul; 94():239-249. PubMed ID: 24650598
[TBL] [Abstract][Full Text] [Related]
15. CaImAn an open source tool for scalable calcium imaging data analysis.
Giovannucci A; Friedrich J; Gunn P; Kalfon J; Brown BL; Koay SA; Taxidis J; Najafi F; Gauthier JL; Zhou P; Khakh BS; Tank DW; Chklovskii DB; Pnevmatikakis EA
Elife; 2019 Jan; 8():. PubMed ID: 30652683
[TBL] [Abstract][Full Text] [Related]
16. Spatially Structured Sparse Morphological Component Separation for voltage-sensitive dye optical imaging.
Raguet H; Monier C; Foubert L; Ferezou I; Fregnac Y; Peyré G
J Neurosci Methods; 2016 Jan; 257():76-96. PubMed ID: 26434707
[TBL] [Abstract][Full Text] [Related]
17. Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data.
Pnevmatikakis EA; Soudry D; Gao Y; Machado TA; Merel J; Pfau D; Reardon T; Mu Y; Lacefield C; Yang W; Ahrens M; Bruno R; Jessell TM; Peterka DS; Yuste R; Paninski L
Neuron; 2016 Jan; 89(2):285-99. PubMed ID: 26774160
[TBL] [Abstract][Full Text] [Related]
18. Semi-automatic 3D morphological reconstruction of neurons with densely branching morphology: Application to retinal AII amacrine cells imaged with multi-photon excitation microscopy.
Zandt BJ; Losnegård A; Hodneland E; Veruki ML; Lundervold A; Hartveit E
J Neurosci Methods; 2017 Mar; 279():101-118. PubMed ID: 28115187
[TBL] [Abstract][Full Text] [Related]
19. Fast two-photon imaging of subcellular voltage dynamics in neuronal tissue with genetically encoded indicators.
Chamberland S; Yang HH; Pan MM; Evans SW; Guan S; Chavarha M; Yang Y; Salesse C; Wu H; Wu JC; Clandinin TR; Toth K; Lin MZ; St-Pierre F
Elife; 2017 Jul; 6():. PubMed ID: 28749338
[TBL] [Abstract][Full Text] [Related]
20. Segmentation of MR image using local and global region based geodesic model.
Li X; Jiang D; Shi Y; Li W
Biomed Eng Online; 2015 Feb; 14():8. PubMed ID: 25971306
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]